Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g00161 ATGGATCATCATAATCAAGGGCATGTTGAGATGGGTCTTCTTGGGGAAAACTTCGATCAGAGTTTGATTGCGAGGATTAGGGATAATGATGGATATGAGAGCCGTTCTGGGAGTGATAATTTCGATGGAGTTTCAGGCGAGGATGATCAGGAAGCTGGTGATGATACCCCTAATAATCAGAGATCCAAGAAGTACCATAGACACACTCCTCACCAAATTCAAGAGCTTGAAACTTTCTTTAAGGATAGTCCTCATCCTGACGAGAAGCAAAGACTGGAACTCAGTAGGAAGCTTGGCTTGGAGACTAAGCAAGTCAAATTCTGGTTTCAAAATCGAAGAACCCAAATGAAGACCCAGCTGGAGCGGCATGAGAATCTGATACTGAGGCAAGAAAATGACAAGCTGAGAGCGGAGAACAGTATGATGAAGGAAGCCATGGCCAACCCAATATGCAGCAACTGTGGAAGCCCAGCCATACCTGGGCAAATCTCATTCGACGAACACCAACTAAGGATCGAAAATGCTCGATTAAAGGACGAACTGAACCGTGTCTGTGCCTTGTCCAACAAGTTTCTGGGAAGGCCAATCTCAACTATGGCTCTTCCAGGTTCAGATTCTGGCCTTGAACTAGCCATTGGAAGGAACAATAATAGTAATAACACTTTGACTGGGTTTGGTAGCATTGGTGTTGTTGGGTCAAGTTTTCCTATGGGACTTGATATGGGGATGATGCAAATGGGAAATAATAATGTTAATGATCAAGTACAGGCTGAGAGATCTATGCTTATAGATCTTGCTTTGTCTGCTTTGGATGAATTAATGAAGATGGCTCAAGCTGATGCCCCTCTTTGGATTAACACCTTGGATGGTGATAATGAAGTACTGAATCTCGATGAGTATGCTCGGATTTTTCCTCCTTGTCTTGGTCCCAAACCTCCTGGTTATGTCACTGAAGCTACTAGAGAAACTGGAATGGTTATGATGAACAGTTTGGTTCTCATCGAAACATTGATGGACTTGAATCGATGGGTGGAGATGTTTGGGAGCATAATTGCTAGATTTGCGCCTCTCGATGTGGTATCAAGTGGCGTCGGAGGGACCAGAAGTGGTACCTTGCTCGTGTTGGAAGCTGAGTTGCAAATGCATACGCCGCTGGTTCCGGTAAGGCAAACGAGGATGCTGAGATTATGCAAGCAGCAATCGGAAAGCCAGTGGGCAGTGGTTGATGTTTCAGTTGAGATGGGTCGAGACCCTACCAATGCGCACAGTTTTGTCAGATGCAGGAGGCTTCCTTCTGGTTGCATTGTCCAAGATATGCCCAACGGTTACTCCAAGGTTACTTTGGTGGAGCATTGGCAATACGACGAGAATGTGGTGCACCAACTTTACCGTCCCATGGTGAACGCCGGCGTTGGTTTCGGTGCTCATAGATGGCTGGCCACCCTCCAAAGGCAATGCGAATGCTTGGCCATCTTGTCCTCTTCCATCCCCACCGATGATCATACAACACTGAGCCAGGGTGGTCGGCGAAGCATGGTGAAGCTGGCACAACGCATGGTGGACAACTTCTGTTCTGGGATAGTGGCTTCCTCTGGCCGGAGGTGGGACACCCTTCATGTCGATACCATTGGAGAAGACGTCAAGATTATGATTCGAACAAACGAAGGCGGCGATCCCGGCGATCCTCACGGAGTCATGCTCAGTGCCACCACTTCCTTCTGGCTGCCCGTGTCCCGGCAAACGTTGTTCGACTTCCTCCGTGACCAGCACCGGAGGTTGGAGTGGGACATCTTGTCCAGCGGCGCCGGAACCATGCAGGAAGTGGCTCTCATTGCAAAAGGACAGTCACATGGTAACTGTGTTTCCCTTCTCCGGGCCAACGGTCTGAATGGGAACGAGACGGGCATGGTGATACTGCAAGAGACATGGACCGATGCGACAGGGTCGATGGTGGTTTATGCACCGGTGGATGTGCAGTCGCTGAACGTGGTGATGAGTGGCGGCGATTCTTCCTACGTGGCTCTCTTGCCTTCTGGGTTTGCCATTCATGCCGACGGTACTAACGTCGGCGGCGGCAACCAGAGTTCAGGAAGTGACGGCAGCGGCGGAGGAAGCCTGCTGACAGTAGGGTTGCAGATACTGGTGAGCAGCCTGCCAACGGGGAAGCTGACGGTGGAGTCGGTAGAAACAGTGAACAATGTGATGAGGGCCACCATTGAGAAGATCAAAGAGGCGGTTCGAGGTGGCTGA 2250 0.4978 MDHHNQGHVEMGLLGENFDQSLIARIRDNDGYESRSGSDNFDGVSGEDDQEAGDDTPNNQRSKKYHRHTPHQIQELETFFKDSPHPDEKQRLELSRKLGLETKQVKFWFQNRRTQMKTQLERHENLILRQENDKLRAENSMMKEAMANPICSNCGSPAIPGQISFDEHQLRIENARLKDELNRVCALSNKFLGRPISTMALPGSDSGLELAIGRNNNSNNTLTGFGSIGVVGSSFPMGLDMGMMQMGNNNVNDQVQAERSMLIDLALSALDELMKMAQADAPLWINTLDGDNEVLNLDEYARIFPPCLGPKPPGYVTEATRETGMVMMNSLVLIETLMDLNRWVEMFGSIIARFAPLDVVSSGVGGTRSGTLLVLEAELQMHTPLVPVRQTRMLRLCKQQSESQWAVVDVSVEMGRDPTNAHSFVRCRRLPSGCIVQDMPNGYSKVTLVEHWQYDENVVHQLYRPMVNAGVGFGAHRWLATLQRQCECLAILSSSIPTDDHTTLSQGGRRSMVKLAQRMVDNFCSGIVASSGRRWDTLHVDTIGEDVKIMIRTNEGGDPGDPHGVMLSATTSFWLPVSRQTLFDFLRDQHRRLEWDILSSGAGTMQEVALIAKGQSHGNCVSLLRANGLNGNETGMVILQETWTDATGSMVVYAPVDVQSLNVVMSGGDSSYVALLPSGFAIHADGTNVGGGNQSSGSDGSGGGSLLTVGLQILVSSLPTGKLTVESVETVNNVMRATIEKIKEAVRGG 749
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g00161 749 MobiDBLite consensus disorder prediction 30 69 - -
Accr1g00161 749 SMART HOX_1 61 123 IPR001356 GO:0003677
Accr1g00161 749 CDD START_ArGLABRA2_like 259 487 - -
Accr1g00161 749 Coils Coil 113 148 - -
Accr1g00161 749 Gene3D - 48 134 - -
Accr1g00161 749 Pfam START domain 265 488 IPR002913 GO:0008289
Accr1g00161 749 CDD homeodomain 63 119 IPR001356 GO:0003677
Accr1g00161 749 Gene3D - 369 486 IPR023393 -
Accr1g00161 749 SMART START_1 264 488 IPR002913 GO:0008289
Accr1g00161 749 SUPERFAMILY Homeodomain-like 47 119 IPR009057 -
Accr1g00161 749 Pfam Homeodomain 63 117 IPR001356 GO:0003677
Accr1g00161 749 SUPERFAMILY Bet v1-like 508 739 - -
Accr1g00161 749 ProSiteProfiles START domain profile. 255 491 IPR002913 GO:0008289
Accr1g00161 749 ProSitePatterns 'Homeobox' domain signature. 94 117 IPR017970 GO:0000981|GO:0006355
Accr1g00161 749 FunFam Homeobox-leucine zipper protein HDG1 46 135 - -
Accr1g00161 749 SUPERFAMILY Bet v1-like 257 488 - -
Accr1g00161 749 ProSiteProfiles 'Homeobox' domain profile. 59 119 IPR001356 GO:0003677
Accr1g00161 749 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 60 746 IPR042160 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g00161 Accr-Chr1 3261278 3265206 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g00161 6 746 Homeobox Transcription Factor Family AT3G61150 53.080 0.0 762
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Accr1g00161 START 4.7e-47 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g00161 K09338 - gmx:100794400 1001.5