Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g00158 ATGGGTTTCCTCCGGCGAATTTTCGGCCGCAAAAAGCCGGCCGCTCCGTCAGTAAGCTCCCACAAGTGTGGCTCTGAAACTGTCAAGAGTAAACGGAGATGGAGTTTCATCAAACACAGCAGAGAAAAATCTCAAAGTGCTACTTCCGATCTCAATCACGGCGACCTTTCCACATCTTCGCTTTCGTACGGTGATTCCTTGAACGCTAATAAACATGCCATTGCTGTCGCCGCGGCGACAGCAGCCGTGGCGGAGGCCGCTCTGGCCGCCGCTCATGCGGCTGCGGAGGTGGTTAGACTCACGAATGGCGTTGGCAGTGGTTGCGGTCCAAGTGCAAGCCAGCACCGGTGGCCGGTAGAAATCGCCGCCGTTAAGATACAGTCGGCGTTTCGTGGTTACTTGGCAAAGAGAGCTCTGAGAGCACTAAAAGCATTGGTGAAGTTGCAAGCGCTGGTAAGAGGTCACATTGTAAGAAAGCAAACTACAGATATGTTGAGGCGCATGCAAACTTTGGTGAGGCTGCAGTCCCGTGCACGTGCAGGTCGCATGCAGTTGTCACATATCCTCCATTCTGCCAAGTCTCCACTCTCTCTTCACCCTGTCTCTGAACACTATGAATCCCCACTTAGAACCAATAGTACTAAATTTGAAGGATCTCCTCTCCTCAAGAGATGCAGTTCCAATGCAAATTCTAGGGACATTGGTTCGGGGAGATCAAGGTTTGGCTCGCAATGGTACGACCATTATTGGATGGAAGAAAATGTTTGGAACCATCCCAGAGGAGAAGACGATGAGAAGAGTGACAAAATTCTGGAAGTTGATACATGGAAGCCACACTTGAAATCCCAAATCGAGAACCGTTTGGCATATGAGTCTCCCTCAAAGCGTTCAACAAGAAGTGTAAACCAAAGTCTCTTCAGTTCCCTAAAGTTTCAGAAGAGAAAAGAAGAGAAAGCTTCAAGAACAGCAGAGACCAACAACATCATCAAAGAACTCTCGACCTCCTATTCATGTCAGAACAGTCCAGAGTCATTTTCTGCTTCAAGGAGAAGAACAGGTCCTTTCACTCCCACAAGGAGTGAGTGTGGCTACTTTGGTCACCCAAACTATATGGCCAACACTGAGTCATCTCGAGCCAAGGCTAGGTCAGTGAGTGCCCCAAGGCAAAGACTTTTTGATTCTGGGAATAACTCAGATAGGCATGCTGATTTAAGAAGCCAATGTTTCACATCCTCAGGCCGCTTGAACAGTCTCTTAAGTGCCCGTCTAAGGTGA 1275 0.4871 MGFLRRIFGRKKPAAPSVSSHKCGSETVKSKRRWSFIKHSREKSQSATSDLNHGDLSTSSLSYGDSLNANKHAIAVAAATAAVAEAALAAAHAAAEVVRLTNGVGSGCGPSASQHRWPVEIAAVKIQSAFRGYLAKRALRALKALVKLQALVRGHIVRKQTTDMLRRMQTLVRLQSRARAGRMQLSHILHSAKSPLSLHPVSEHYESPLRTNSTKFEGSPLLKRCSSNANSRDIGSGRSRFGSQWYDHYWMEENVWNHPRGEDDEKSDKILEVDTWKPHLKSQIENRLAYESPSKRSTRSVNQSLFSSLKFQKRKEEKASRTAETNNIIKELSTSYSCQNSPESFSASRRRTGPFTPTRSECGYFGHPNYMANTESSRAKARSVSAPRQRLFDSGNNSDRHADLRSQCFTSSGRLNSLLSARLR 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g00158 424 MobiDBLite consensus disorder prediction 375 403 - -
Accr1g00158 424 ProSiteProfiles IQ motif profile. 143 170 IPR000048 GO:0005515
Accr1g00158 424 MobiDBLite consensus disorder prediction 34 55 - -
Accr1g00158 424 Pfam IQ calmodulin-binding motif 143 160 IPR000048 GO:0005515
Accr1g00158 424 Pfam IQ calmodulin-binding motif 122 140 IPR000048 GO:0005515
Accr1g00158 424 MobiDBLite consensus disorder prediction 34 48 - -
Accr1g00158 424 MobiDBLite consensus disorder prediction 375 393 - -
Accr1g00158 424 SMART iq_5 141 162 IPR000048 GO:0005515
Accr1g00158 424 SMART iq_5 118 140 IPR000048 GO:0005515
Accr1g00158 424 MobiDBLite consensus disorder prediction 338 360 - -
Accr1g00158 424 ProSiteProfiles IQ motif profile. 120 147 IPR000048 GO:0005515
Accr1g00158 424 MobiDBLite consensus disorder prediction 338 355 - -
Accr1g00158 424 Pfam Protein of unknown function (DUF4005) 338 402 IPR025064 -
Accr1g00158 424 PANTHER IQ-DOMAIN 5-RELATED 27 401 - -
Accr1g00158 424 Gene3D - 118 170 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g00158 Accr-Chr1 3217536 3220035 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g00158 1 409 IQD Protein Family AT5G07240 45.349 2.34e-60 201
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g00158 - - pcin:129293998 603.979