Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g00153 ATGCCCCCTATGGCACCTTCTCGGGTGGCTGGAGGGTTAGCCCAGTCATCATCAAGTTCTGGAATATTCTATCAAGGAGATGGGCAATCACAGAATGCTGTTGAGTCTCACTTAAGTTCATGTTTTGGTAACACATCCAACTCATTTCCTGGAACTGGACATTCAAATCTGGGTCCAGTTTCTGGCGACATGAGTAATGCTATGCTAAACAGTGTGGCAAATTCAGGGCCAAGTGTTGGAGCTAGTTCATTAGTTACAGATGCAAACTCTGCACTATCAGGGGGACCCCGTTTGCAGAGAAGCGCTAGCAATAACACTGATTCATACTTACGTTTACCTGCATCACCCATGTCATTCTCATCAAATAATATTAGTATTTCGGGGTCATCTGTTATGGATGGTTCTTCTGTAGTACAGCAGAGCTCTCATCAAGACCAGAATGTTCAACAATTGCAAAAGAATCATGAGCAAATACAGGGTGCTTCTAGTGCAACATCTTTGCCCGCATTTCAAACTGGCCCAGCTCCACTGCCAATGGGTACGCGAGTGCCTGGATCTTTGATACAAGATCCAAACAATCTATCCCAGATGCATAAGAAACCTCGAGTGGATATCAAGCAAGAAGATATGATGCATCAGCAGGTAATACAACAGCTTCTTCAGAGGCAGGACCCCATGCAGTTCCAGGGTCGTAATCCCCAGCTACAGGCTTTGCTCCAGCAGCAGAGACTGAGGCAACAGCAACAGCAACAGCAGCAACAAATCCTTCAGTCAATGCCACAGTTACAGAGAGCTCACCTGCAACAGCAGCAGCAACAGATGCAATTGAGGCAGCAATTACAACAAGAAGCAATGCAGCCATCATCTTCCATGAAACGCCCATATGATAGTGGTGTCTGTGCTCGTCGTTTGATGCAATACCTATATCATCAAAGGCAACGACCGAATGATAATAGTATTGCCTATTGGAGAAAATTTGTGGCTGAATATTACTCTCCGCGTGCAAAGAAACGGTGGTGTTTGTCATTATATGATAATGTTGGGCAACATACTCTTGGTGTTTTCCCCCAAGCAGCTATGGATGCATGGCAGTGCGACATTTGTGGTTCTAAATCTGGAAGGGGATTTGAGGCAACTTTTGAAGTACTCCCCAGACTAAACAAAATCAAATTTGACAGTGGGGTGATCGACGAACTTATGTTTTTGGACTTGCCCCGTGAGTGTAGATTTCCTTCTGGTCTAATGATGTTAGAATATGGAAAGGCAGTTCAAGAGAGCGTGCATGAGCAACTTCGCGTTGTTCGTGAGGGTCAACTTCGCATCATATTTACACAAGATCTGAAGATATTATCTTGGGAATTTTGTGCAAGACGCCATGAAGAACTTATTCCTCGAAGGATGATTGCACCACAGGTCAGCCAATTGGTTCAAGTGGCTGAAAAGTGCCAGCGTTGTATTACTGAAAGTGGGTCTGATGGGATTTCTCAGCAGGATTTGCAGACAAACAGCAATATGGCAATAACAGCTGGGTGTCAGCTGGCAAAGACTTTGGACTTACAGTCTCTGAATGACCTGGGTTTCTCAAAACGATATGTGAGATGTTTGCAGATATCGGAGGTTGTGAATAGCATGAAAGATCTGATGGATTTCTGCCGAGACCACAAAATTGGGGCACTTGAGGGCTTGAAAAATTATCCTAGGCATGCAACTACAGCCAAGCTCCAGATGCAAAAGATGCAAGAGATGGAACAGTTAGCGAACGTTCAAGGTCTGCCGACTGACCGGAACACACTTAATAAGCTAATGGCATTTCATCCTGGATTGAATAACCAAATGAACAACAATCCTAACCTTGTTAATCGTGGTGCATTGGGTGGATCTGCACATGCTGCATTGGCACTGACTAACTACCAGAATCTCCTCATGAGGCAAAACTCCATGAATTCAACCCCTAACTCACTTCAGCGAGAAGCTTCTCCCTCCTTCAATAATGCAAACCAGAGCCCCTCTTCACACTTTCAAGGCAGCGGCACGGCTGCTTTACTTCCAGGCTCCATGCAGAACTTGCCTGTCAGTGGTTTCTCAAGTCCCCGTTTAACTCCGCAGCAGCAGCAGCAGCTGCAACAACTTAAACAGCACTCATCAAGTGCGAATAGCTTACTGCAACAAAATCATCCGCAGGGCTCTCAAGCAAATCAGGCTGTACCACCCCATATGCTCCAGCAACTAGTTCAGGAATTGTCTAATAACAGCAGTGGAGGAGTTCAATCGCAGTTCCATGCTGGACCCAACCCTAATACAAATAATGGTCTGGGTTTTCGAGTCAACTCTCCATCAGCAACTGGAGGAACTTCCAATGTTTCTGGAAGTAACAGAGCTGCTGCTCCTAGCAGGAGCAACAGCTTCAAAGCTGCTTCAAACAGTGATTCTTCTGCAGCCGGTGGCAACAATGGATTCAACCAAAGAACATCTGATATGCCTCAAAATCTCCATCTGCAAGATGTGGTTCAGGATATCACCCGCGAGTTCACCGATAATGGCTTCTTTAACAGTGACCTCGATGACTTTCCGTGGAAGGCATGA 2583 0.4553 MPPMAPSRVAGGLAQSSSSSGIFYQGDGQSQNAVESHLSSCFGNTSNSFPGTGHSNLGPVSGDMSNAMLNSVANSGPSVGASSLVTDANSALSGGPRLQRSASNNTDSYLRLPASPMSFSSNNISISGSSVMDGSSVVQQSSHQDQNVQQLQKNHEQIQGASSATSLPAFQTGPAPLPMGTRVPGSLIQDPNNLSQMHKKPRVDIKQEDMMHQQVIQQLLQRQDPMQFQGRNPQLQALLQQQRLRQQQQQQQQQILQSMPQLQRAHLQQQQQQMQLRQQLQQEAMQPSSSMKRPYDSGVCARRLMQYLYHQRQRPNDNSIAYWRKFVAEYYSPRAKKRWCLSLYDNVGQHTLGVFPQAAMDAWQCDICGSKSGRGFEATFEVLPRLNKIKFDSGVIDELMFLDLPRECRFPSGLMMLEYGKAVQESVHEQLRVVREGQLRIIFTQDLKILSWEFCARRHEELIPRRMIAPQVSQLVQVAEKCQRCITESGSDGISQQDLQTNSNMAITAGCQLAKTLDLQSLNDLGFSKRYVRCLQISEVVNSMKDLMDFCRDHKIGALEGLKNYPRHATTAKLQMQKMQEMEQLANVQGLPTDRNTLNKLMAFHPGLNNQMNNNPNLVNRGALGGSAHAALALTNYQNLLMRQNSMNSTPNSLQREASPSFNNANQSPSSHFQGSGTAALLPGSMQNLPVSGFSSPRLTPQQQQQLQQLKQHSSSANSLLQQNHPQGSQANQAVPPHMLQQLVQELSNNSSGGVQSQFHAGPNPNTNNGLGFRVNSPSATGGTSNVSGSNRAAAPSRSNSFKAASNSDSSAAGGNNGFNQRTSDMPQNLHLQDVVQDITREFTDNGFFNSDLDDFPWKA 860
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g00153 860 Pfam LIM-domain binding protein 303 562 IPR029005 -
Accr1g00153 860 MobiDBLite consensus disorder prediction 130 182 - -
Accr1g00153 860 MobiDBLite consensus disorder prediction 647 733 - -
Accr1g00153 860 PANTHER LIM DOMAIN-BINDING PROTEIN 45 849 IPR029005 -
Accr1g00153 860 MobiDBLite consensus disorder prediction 11 28 - -
Accr1g00153 860 MobiDBLite consensus disorder prediction 1 28 - -
Accr1g00153 860 MobiDBLite consensus disorder prediction 750 829 - -
Accr1g00153 860 MobiDBLite consensus disorder prediction 130 170 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g00153 Accr-Chr1 3142025 3147727 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g00153 291 569 C2H2 Transcription Factor Family AT1G43850 58.065 5.21e-109 353
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g00153 - - gmx:100816886 1146.34