Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g00129 ATGAATTTGGGTTTGTTTGAGGGCCAAAGCAGTGGTATGGATCTTTCTAAGAGCAACAGTGGTTCGGAACCTTCAACTTCTTACAGTTGTTTCAAAGTAGCAAATCTAAGTGAAACAATATTGGACACAAAGGAGTCTGCTAACTTGAAAGATCGTTATGTTCTTGGCGAGCAGTTAGGTTGGGGGCAGTTTGGTGTTATCAGGGCGTGCACGGACAAGTTGACCGGAGAGGTTTTAGCCTGTAAGTCGATTGCTAAAGATAGATTGGTAACATCAGATGATCTGCGAAGTGTCAAACTTGAGATTGAGATAATGGCTAGGCTATCTGGCCACCCAAACGTTGTAGATCTCAAGGCAGTTTATGAAGAGAAGGACTTTGTACATCTGGTGATGGAGCTTTGTGCTGGTGGTGAGCTATTTCACCGGCTAGAGAAGCATGGACGGTTTTCTGAATCTGAAGCCCGTGTTCTGTTTAGGCATCTGATGCAGGTGGTTTTGTATTGTCATGAAAACGGGGTTGTTCATAGAGATTTGAAGCCTGAGAACATTCTCTTAGCAACAAGATCCTCCTCATCTCCAATCAAATTGGCAGATTTTGGACTTGCAACTTACATCAAGCCTGGACAAAGTTTGCATGGGTTAGTAGGGAGTCCATTCTATATAGCTCCAGAGGTACTTGCAGGTTCTTATAACCAGGCTGCTGATGTTTGGAGTGCTGGTGTCATTCTTTACATTTTACTTAGTGGCATGCCTCCGTTTTGGGGTAAGACTAAGTCACGGATCTTTGAAGCCGTTAAGGCGGCTGACCTGAGGTTCCCATCTCAACCTTGGGATCACATTTCTAAATCAGCCAAGGATTTGATTAAGGGAATGCTCTGTACAGAACCTTCTCAAAGGCTCACTGCTCAGCAGGTCTTAGATCATTGTTGGATGGAGAGCAATCAAACAAATCCTGAACAAATAATTGAATGTGACATCAAAAGTTGTGGTGAATGGGATGTTGGTGACAGCTCATTCTCTGTGTCCTTTATGCCCAGGAATCAGGACATCAGCTTTGGCGCCGAATCTCCTGCATGTGATGCTCAGTCTCCAACTTTCACGTGCAGATCATCATTTTCTTCATTTCTGCCGGAACCATTGACTCCTTGTTCAGCTTTGGGTGGGTTTTCATTCAAGAGTGTCGGTGATTCTGCTGGTTTGGACTTCTCTTCTCCTGTTTCTTCAATGCCAAGCTTTGCATTTCTCGGCACCAATTCTGTTGTTGAGAAGAGGAGTTGTACATTAGATTTCTCAACTAATGAATCTGTGAAGACAATTGCTGGAGCAGAATCAAGCTTGGGAAAACTACTTCTATCACCAGATTCTGCTCTTTGTTGTGGACCGGATATTAAAGCAAGTAACCGTAAGCCAATGGAGACTAAAAGGTCTAGCGGTACCAACGGTCATAGGGTTTTAGGAATGCACAGCAAAAGAAACCGAACAATTGGGCTCGGCGAACGTGAGCAACTTGACCTTGTGGTGACCGAATCTGTCATTCGATGGTCATCGTGCACGCAACTCCCAACATCTCTTAGGTCATCTCTTGTCTGTTGA 1593 0.4426 MNLGLFEGQSSGMDLSKSNSGSEPSTSYSCFKVANLSETILDTKESANLKDRYVLGEQLGWGQFGVIRACTDKLTGEVLACKSIAKDRLVTSDDLRSVKLEIEIMARLSGHPNVVDLKAVYEEKDFVHLVMELCAGGELFHRLEKHGRFSESEARVLFRHLMQVVLYCHENGVVHRDLKPENILLATRSSSSPIKLADFGLATYIKPGQSLHGLVGSPFYIAPEVLAGSYNQAADVWSAGVILYILLSGMPPFWGKTKSRIFEAVKAADLRFPSQPWDHISKSAKDLIKGMLCTEPSQRLTAQQVLDHCWMESNQTNPEQIIECDIKSCGEWDVGDSSFSVSFMPRNQDISFGAESPACDAQSPTFTCRSSFSSFLPEPLTPCSALGGFSFKSVGDSAGLDFSSPVSSMPSFAFLGTNSVVEKRSCTLDFSTNESVKTIAGAESSLGKLLLSPDSALCCGPDIKASNRKPMETKRSSGTNGHRVLGMHSKRNRTIGLGEREQLDLVVTESVIRWSSCTQLPTSLRSSLVC 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g00129 530 CDD STKc_CAMK 52 310 - -
Accr1g00129 530 Gene3D Phosphorylase Kinase; domain 1 54 139 - -
Accr1g00129 530 ProSitePatterns Protein kinases ATP-binding region signature. 59 86 IPR017441 GO:0005524
Accr1g00129 530 SUPERFAMILY Protein kinase-like (PK-like) 50 382 IPR011009 -
Accr1g00129 530 PANTHER SERINE/THREONINE-PROTEIN KINASE 42 323 - -
Accr1g00129 530 SMART serkin_6 53 311 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g00129 530 MobiDBLite consensus disorder prediction 1 26 - -
Accr1g00129 530 FunFam Phosphoenolpyruvate carboxylase kinase 140 327 - -
Accr1g00129 530 FunFam Calcium-dependent protein kinase 1 55 138 - -
Accr1g00129 530 ProSitePatterns Serine/Threonine protein kinases active-site signature. 173 185 IPR008271 GO:0004672|GO:0006468
Accr1g00129 530 ProSiteProfiles Protein kinase domain profile. 53 311 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g00129 530 Pfam Protein kinase domain 53 311 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g00129 530 Gene3D Transferase(Phosphotransferase) domain 1 140 329 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g00129 Accr-Chr1 2643857 2646390 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g00129 48 319 EF-hand Containing Proteins AT5G12180 51.838 5.61e-99 307
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Accr1g00129 Pkinase 6.5e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g00129 - - gmx:100776088 839.336