Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g00124 ATGGAAGTGAATCAGAACCAGGGAGGTGAACACCAGCATGATGATTTTAATGATGAGGAAGAAAGCCACAGTGCGGATATATCTCCTTCTGAGACGACGTCAATGGCGGAAGCGGCGGAGTCACATTTTCCAGAGCCAGCGCCGCAGTCGCCGCCGCCAGCGGCACCGCTGAAAGAAGAGTTCACGGAGACAGGACAAAGCCTGGACGAGTCTCTTCCCATGAACCTTATTCAGGTACCGTTAACTATGTCAACGCCGGGTAGAAATGAGGTGGTGTCCGCCAAGAAACCTTCCAAGGACCGCCATACAAAAGTGGAAGGCCGTGGGAGGAGAATCCGAATGCCAGCCACGTGCGCGGCCAGGATCTTCCAGCTCACGCGAGAGCTCGGCCACAAATCAGACGGAGAAACAATCCGGTGGTTGCTCGAGCACGCTGAACAGGCCATAATAGAAGCTACTGGCACGGGAACAATCCCGGCAATCGCTGTCTCCGTTGGTGGAACCCTAAAAATCCCAACCTCATCCCCGGCGAGACCAGACGGCGAAGAAACCCCAAGAAAACGAAGACGACGGGCATCGAATAGTGAGTTCATTGATGTGAATGATCCAACCTCAATCTCTTCAGGGCTAGCTCCGGTTGCTCCGATTTCATACGGAGCAGTTGGTTCCTCCGGAGGCGGAGGTGGCGGCAGCGGCGGTGTTGCTCCGGGAGGACTTGTCCCTTTGTGGCCGCTGGGTGGGACCAACACATCGGGACCATTCTTGATGTTTCCAAATACTGATGGTTCAGCAAATCAACCACAATACTGGGCGATTCCGGCGACTGCGACGCCGTTTTTCAATGTCCAAGCGAGACCCATTTCAAACTTCGTCTCTGCGATGATGCAATCCAGTGAGCAATTAGTGCCTTCTGCAGGTCCCTTAAACGTTTCGAATGGTATTTCGGTTTCGGGTACTGCCAACTCTTCGTCGACGATGGCTCCTAGTTTGAGCTCCGGGATGAGTCCGAGTGTTACTGCTCCTCCGGCTACGTCGGCGACTCAGATGCTTAGGGATTTCTCCTTGGAAATTTATGACAAAAAGGAGCTGCAGTTTTTGGGTCGATCTGCGAATTCTGAACCGCCGAGTTCAAAGCCTTGA 1140 0.5351 MEVNQNQGGEHQHDDFNDEEESHSADISPSETTSMAEAAESHFPEPAPQSPPPAAPLKEEFTETGQSLDESLPMNLIQVPLTMSTPGRNEVVSAKKPSKDRHTKVEGRGRRIRMPATCAARIFQLTRELGHKSDGETIRWLLEHAEQAIIEATGTGTIPAIAVSVGGTLKIPTSSPARPDGEETPRKRRRRASNSEFIDVNDPTSISSGLAPVAPISYGAVGSSGGGGGGSGGVAPGGLVPLWPLGGTNTSGPFLMFPNTDGSANQPQYWAIPATATPFFNVQARPISNFVSAMMQSSEQLVPSAGPLNVSNGISVSGTANSSSTMAPSLSSGMSPSVTAPPATSATQMLRDFSLEIYDKKELQFLGRSANSEPPSSKP 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g00124 379 MobiDBLite consensus disorder prediction 84 108 - -
Accr1g00124 379 Pfam TCP family transcription factor 98 168 IPR017887 -
Accr1g00124 379 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 39 361 IPR005333 GO:0003700
Accr1g00124 379 MobiDBLite consensus disorder prediction 93 108 - -
Accr1g00124 379 MobiDBLite consensus disorder prediction 7 26 - -
Accr1g00124 379 MobiDBLite consensus disorder prediction 319 345 - -
Accr1g00124 379 MobiDBLite consensus disorder prediction 180 196 - -
Accr1g00124 379 ProSiteProfiles TCP domain profile. 98 152 IPR017887 -
Accr1g00124 379 MobiDBLite consensus disorder prediction 1 66 - -
Accr1g00124 379 MobiDBLite consensus disorder prediction 169 204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g00124 Accr-Chr1 2589195 2590334 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g00124 95 366 TCP Transcription Factor Family AT5G51910 51.418 1.08e-74 232
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Accr1g00124 TCP 3.8e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g00124 - - qsa:O6P43_005529 464.922