Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g00111 ATGTTTCCTTCAACACAACGAGGCAACAATGAGAGGGTCATCGAATTTTCTAGCCGTCCCCACCACCTCCAGCAGAAAAGCTCAGAGGATCTCATTCTGGACGCCGGCCAAGCTCATTATCATGCTTCTCTGGACATCATCAATTTCTCCGATAAAAAATTACCAAGTATTAGAACCAACAAGCTACTTTGTGAGTCTACAGCTAGTGACAAGATTAACCATTATCGAAATTCTGATAATAAGGACTACAAGAAGAAGAACGAGAAGCTCATTCACAGAGAAATTGAGAGGCAAAGAAGGCAAGAAATGGCTACTCTCCATGCTTCCCTTAGATCTCTTCTTCCACTCGAGTTCATCAAGGGGAAGCGTTCTATGTCAGATCACATGAATGAAGCGAAGAACTACATAAAGCACCTGCAAGAGAGAATCAAAGAACTGAGCGCCAAGAGAGATGAACTGAAGAAACTGACGCGGAATAATTCTTCGAATCCAGAAGAAACACACGAGTGTGAAAAGTACACATATAGCGGCTTTTTCAGTGTTCACGAGATTAATAACAATGTTGGTGTTGGAATAGAAGTTTCCAGTTCTTTCGGAGAGGAAACGTTGTTTCCCCTTTCAAAATTACTTAAATTGATTCTTGACGAAGGACTTGGAGTTGTTAATTGTGTCACCAGCCAAATCAATGGAAGATTAATTCACAGTGTTCAGTGTGAGGTTACTAACAGTTCCGACGACCGTGCAGACCTACCCGCGCTGAGAAGGAAAATTGTCGATCTAGTCCCATCATTTAAATGTTCTGATTAA 807 0.4151 MFPSTQRGNNERVIEFSSRPHHLQQKSSEDLILDAGQAHYHASLDIINFSDKKLPSIRTNKLLCESTASDKINHYRNSDNKDYKKKNEKLIHREIERQRRQEMATLHASLRSLLPLEFIKGKRSMSDHMNEAKNYIKHLQERIKELSAKRDELKKLTRNNSSNPEETHECEKYTYSGFFSVHEINNNVGVGIEVSSSFGEETLFPLSKLLKLILDEGLGVVNCVTSQINGRLIHSVQCEVTNSSDDRADLPALRRKIVDLVPSFKCSD 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g00111 268 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 77 257 - -
Accr1g00111 268 FunFam Transcription factor bHLH126 79 168 - -
Accr1g00111 268 Coils Coil 129 159 - -
Accr1g00111 268 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 86 155 IPR036638 GO:0046983
Accr1g00111 268 CDD bHLH_AtORG2_like 88 163 - -
Accr1g00111 268 SMART finulus 93 145 IPR011598 GO:0046983
Accr1g00111 268 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 87 139 IPR011598 GO:0046983
Accr1g00111 268 Gene3D - 78 172 IPR036638 GO:0046983
Accr1g00111 268 Pfam Helix-loop-helix DNA-binding domain 91 140 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g00111 Accr-Chr1 2302291 2303594 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g00111 77 258 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G51780 44.624 1.94e-38 132
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Accr1g00111 HLH 2.1e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g00111 - - gmx:100780888 218.009