Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g00110 ATGTTTCCTTCACAACAACGAGGCAACAAAGAGAGGGTCATCGAATTTTCTAGCCGTCCCCACCACCAGCAGCAGAAAATCTCAGAGGATCTCATTCTGGACGCCGACCATGCTCATCATCATGCTTCTCTGGACATCATCAATTTCGCCGATAAAAAATTACAAAGCATTAGCACAAACAAGCTACTTTATGAGTCCACAGCTAGTGATAAGATTAACCATTATCGAAATTCTGATAATAAGGACTACAAGAAGAAGAACGAGAAGCTCATTCACAGAGAGATTGAGAGGCAAAGAAGGCAAGAAATGGCTACTCTCCATGCTTCCCTTAGATCTCTTCTTCCACTCGAGTTCATCAAGGGGAAGCGTTCGATGTCAGATCACATGAATGAAGCAAAGAACTACATAAAGCACCTGCAAAAGAGAATCAAAGAACTGAGCGCCAAGAGAGATGAACTGAAGAAACTAACGGAGAATAATTCTTCGAATCCAGAAGAAACACACGAATGCGAAAAGTACGATCATAGCGGCTTTTTCAGTGTTCACGAGATTGATAACAATGTTGGTGTTGGAATAGAAGTTTCTAGTTCCTTCGGAGAGGAAAGGTTGTTTCCCCTTTCAAAATTACTTAAATTGATGCTTGACGAAGGACTTGGAGTTGTTAATTGTGTTACCAGCCAAATAAATGGAAGATTAATTCACAGTGTTCAGTGTGAGGTTACTAACAGTTCCGACGACCGTGCAGACCTACCCGCGCTGAGAAAGAAAATTGTCCATCTAGTCCCAGCATTTAAATGTTCTGATTAA 807 0.4126 MFPSQQRGNKERVIEFSSRPHHQQQKISEDLILDADHAHHHASLDIINFADKKLQSISTNKLLYESTASDKINHYRNSDNKDYKKKNEKLIHREIERQRRQEMATLHASLRSLLPLEFIKGKRSMSDHMNEAKNYIKHLQKRIKELSAKRDELKKLTENNSSNPEETHECEKYDHSGFFSVHEIDNNVGVGIEVSSSFGEERLFPLSKLLKLMLDEGLGVVNCVTSQINGRLIHSVQCEVTNSSDDRADLPALRKKIVHLVPAFKCSD 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g00110 268 Gene3D - 78 172 IPR036638 GO:0046983
Accr1g00110 268 Coils Coil 129 159 - -
Accr1g00110 268 MobiDBLite consensus disorder prediction 1 22 - -
Accr1g00110 268 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 86 155 IPR036638 GO:0046983
Accr1g00110 268 Pfam Helix-loop-helix DNA-binding domain 91 140 IPR011598 GO:0046983
Accr1g00110 268 CDD bHLH_AtORG2_like 88 163 - -
Accr1g00110 268 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 76 259 - -
Accr1g00110 268 FunFam Transcription factor bHLH126 79 167 - -
Accr1g00110 268 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 87 139 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g00110 Accr-Chr1 2220877 2222199 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g00110 77 260 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G51780 43.915 7.47e-39 133
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Accr1g00110 HLH 9e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g00110 - - gmx:100780888 215.312