Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g00109 ATGCCATCCCGGCGGCGCCACTCCTCAACGGCGCCTCCTGAGGTGGTTGCAGTCGAACCATATCCACCAACTTGTTCCCTCTTCTTTCTCGCTTGTTTTCGCCGGCACACCAGAAAACGCACCACCCCTTCCTCCGATTCCGAGTCAAAGCCTCCCCATCGCTTCTCCTACTCCTCCCTCCTCCACGCCACCGCCTCCTTCTCCACCCGCATCGGCAACGGTGGCTTCGGACCTGTCTTCTCCGGTGTGCTGCCCTTGACCCGAAAGCCCATCGCCGTCAAGCTCATGGACTCTGCCTCTTTCCAAGGCGAGCGCGAGTTTCACAACGAGCTTTTCTTCGCCTCCAAGCTTTGTTCCCAACACATCGTCGTCGCGATTGGCTCCGCCTCCGATAGGGATCGCCGGAGATTCTTGCTGGTGTACGATCTAATGCCCAACGGAAGTCTTCAAGATGCTCTGTTACGACGGAAGAAACCTGAACTAATGGATTGGAAGAAACGTTTCGCCATAATTATCGATATAGCTAAAGGAATCCGTGACCTTCATTCTTGCGACCCACCTGTGATTCACGGAGATATCAAGCCGAGTAATATTCTGCTGGACGCTTCTTTCTCAGCGAAAATTTCCGATTTCGGTCTCGCTCGGTTGAAATCGGAATCCCATTATTTTGATATTTTCAGTGGAATTGATTATTCTGGGTCGGTGGTTGAGGAAACAGAGAGCGTGATTACTGGTTTTGAGGAGAAAACAGAATCCATGTCAGAAACATCGCCGGTAAACCGCGACAGGGGTACGAAGAACGTTGAAAGGTTGAAGAGCAGATCAATGAAGGATTGTTGGAGGAAGGAAGACGATGAAAAAAATAAGAGCAAGAAGGAAAATAAGAACAAGAAAAAGGGATTTTACAGTGATGAAGAAGCATTTGACAGAGAGATTAAGAAGAAAGGTACTAGGAGTATCGATTGGTGGTTTGACGGAATTAGAAGGAACAGCCATGATTCTTTAAGCGGAGAAATTCAAATTCCAAAGAGCGGTGGAATCAGTAGTACGCCAAGTCTGAAAGGAACAGTTTGTTACGTAGCTCCAGAGTGCAGCCATGGCAGCGGAGAAATGACAGAGAAATGCGATGTGTACAGTTTTGGGGTTCTATTGCTTGTGATAGTTTCAGGAAAACGGCCGATTGAGGTGGAGATAGGTTCACCATTGTCAGAGATTCAGAGAGGGAATCTAATTTACTGGGCACGCCATTGCGCTCGAAATGGGAAGCTTCTAGAACTGGTGGATCAGAGAATGAGTATGAAGTTGTCGGATAAAGAACAGGCTCTGCTCTGTATTAAGGTGGCTCTGCTCTGTCTTGTAAAGACACCGTCTCCTCGTCCTTCGATGGAAGAGGTTTTGAGAATTCTCTGCGGTGCGATGGAGCCACCGCAATTGCCGACGGAATATTTGTCTTCGTCATCACCATCTCCATTTCCCTTCAAGTCCGGGAAAATCTTTCAGTGA 1503 0.4844 MPSRRRHSSTAPPEVVAVEPYPPTCSLFFLACFRRHTRKRTTPSSDSESKPPHRFSYSSLLHATASFSTRIGNGGFGPVFSGVLPLTRKPIAVKLMDSASFQGEREFHNELFFASKLCSQHIVVAIGSASDRDRRRFLLVYDLMPNGSLQDALLRRKKPELMDWKKRFAIIIDIAKGIRDLHSCDPPVIHGDIKPSNILLDASFSAKISDFGLARLKSESHYFDIFSGIDYSGSVVEETESVITGFEEKTESMSETSPVNRDRGTKNVERLKSRSMKDCWRKEDDEKNKSKKENKNKKKGFYSDEEAFDREIKKKGTRSIDWWFDGIRRNSHDSLSGEIQIPKSGGISSTPSLKGTVCYVAPECSHGSGEMTEKCDVYSFGVLLLVIVSGKRPIEVEIGSPLSEIQRGNLIYWARHCARNGKLLELVDQRMSMKLSDKEQALLCIKVALLCLVKTPSPRPSMEEVLRILCGAMEPPQLPTEYLSSSSPSPFPFKSGKIFQ 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g00109 500 SMART serkin_6 65 468 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g00109 500 ProSiteProfiles Protein kinase domain profile. 65 483 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g00109 500 FunFam Os07g0541700 protein 144 226 - -
Accr1g00109 500 Pfam Protein kinase domain 68 221 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g00109 500 ProSitePatterns Serine/Threonine protein kinases active-site signature. 188 200 IPR008271 GO:0004672|GO:0006468
Accr1g00109 500 MobiDBLite consensus disorder prediction 246 274 - -
Accr1g00109 500 SUPERFAMILY Protein kinase-like (PK-like) 48 490 IPR011009 -
Accr1g00109 500 Gene3D Phosphorylase Kinase; domain 1 52 143 - -
Accr1g00109 500 Gene3D Transferase(Phosphotransferase) domain 1 144 327 - -
Accr1g00109 500 Gene3D Transferase(Phosphotransferase) domain 1 330 478 - -
Accr1g00109 500 Pfam Protein tyrosine and serine/threonine kinase 351 468 IPR001245 GO:0004672|GO:0006468
Accr1g00109 500 PANTHER OS07G0586332 PROTEIN 27 255 IPR044576 -
Accr1g00109 500 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 32 - -
Accr1g00109 500 MobiDBLite consensus disorder prediction 246 261 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g00109 Accr-Chr1 2215311 2216813 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g00109 343 469 Receptor kinase-like Gene Family AT3G58690 33.594 7.17e-11 62.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XI Accr1g00109 Pkinase 7.5e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g00109 - - aprc:113872924 438.343