Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g00091 ATGGTGAGCCAGAGGCAGCGACTTGCTCGGAATAGATTCAAAGCAGAGCACCCTGAACTGTTCCCAAAGCCGGAGCCGACGCCCCCGAAAGACCCCAACAAGAAGAAGAGGAAGAAACCGAAGAGTTTGCACCAGCGCAAAAAGGGAGAATCTAAAGAGCTCGGTGCTACTAATAAACCCTTCAAAAAGAGTTTCAACAAACACCCACTTAGAGTTCCTGGTATGAAGCCTGGTGAGAGTTGTTTCATCTGCAAAGCTAAAGACCATATTGCTAAGTCCTGTCCCGAAAAAGCTGAGTGGGAAAAGAATAAGATATGTTTACGTTGTCGGCAACGTGGTCATAGAGCTAAGAATTGCCCTCAGGTGAAAGATAGCGCCAATGATTCGAAAATATGCTATAATTGTGGAGAAACCGGACACTCACTTTCACAATGTCCACATTCACTACAAGATGGGGGAACAAAATTTGCTGTGTGCTTTGTGTGTAATGGACGTGGGCACTTGAGCAAAAACTGCCCTCAAAATGCCCATGGCATCTATCCAAAGGGTGGTTGCTGTAAGATATGTGGTGGTGTGACACATTTGGCAAGGGATTGTCCTGACAAAGGGAGAAAAGAGTCTGCTGCCAATGGGTCTATGAACGCTGCCACTGGAATTGAAGGAAGGCCCAGAAATCAGGTGACCAAACTTGTGAGCGGGGATGATCTTGAAGATGACTTCATGGCTGATGAAACATCTAATGTTGACAAGCCCTCCAAATCTAAAAATGTTAGTGAAAAACCAAAAAAGAAGGGTCCCAAAGTTGTAAACTTCTAA 816 0.451 MVSQRQRLARNRFKAEHPELFPKPEPTPPKDPNKKKRKKPKSLHQRKKGESKELGATNKPFKKSFNKHPLRVPGMKPGESCFICKAKDHIAKSCPEKAEWEKNKICLRCRQRGHRAKNCPQVKDSANDSKICYNCGETGHSLSQCPHSLQDGGTKFAVCFVCNGRGHLSKNCPQNAHGIYPKGGCCKICGGVTHLARDCPDKGRKESAANGSMNAATGIEGRPRNQVTKLVSGDDLEDDFMADETSNVDKPSKSKNVSEKPKKKGPKVVNF 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g00091 271 SMART c2hcfinal6 131 147 IPR001878 GO:0003676|GO:0008270
Accr1g00091 271 SMART c2hcfinal6 105 121 IPR001878 GO:0003676|GO:0008270
Accr1g00091 271 SMART c2hcfinal6 158 174 IPR001878 GO:0003676|GO:0008270
Accr1g00091 271 SMART c2hcfinal6 80 96 IPR001878 GO:0003676|GO:0008270
Accr1g00091 271 SMART c2hcfinal6 185 201 IPR001878 GO:0003676|GO:0008270
Accr1g00091 271 ProSiteProfiles Zinc finger CCHC-type profile. 106 121 IPR001878 GO:0003676|GO:0008270
Accr1g00091 271 SUPERFAMILY Retrovirus zinc finger-like domains 126 176 IPR036875 GO:0003676|GO:0008270
Accr1g00091 271 Pfam Zinc knuckle 131 147 IPR001878 GO:0003676|GO:0008270
Accr1g00091 271 Pfam Zinc knuckle 158 174 IPR001878 GO:0003676|GO:0008270
Accr1g00091 271 Pfam Zinc knuckle 106 121 IPR001878 GO:0003676|GO:0008270
Accr1g00091 271 MobiDBLite consensus disorder prediction 9 32 - -
Accr1g00091 271 Gene3D - 74 126 - -
Accr1g00091 271 Gene3D - 154 217 - -
Accr1g00091 271 SUPERFAMILY Retrovirus zinc finger-like domains 74 122 IPR036875 GO:0003676|GO:0008270
Accr1g00091 271 Gene3D - 127 153 - -
Accr1g00091 271 MobiDBLite consensus disorder prediction 1 70 - -
Accr1g00091 271 MobiDBLite consensus disorder prediction 202 271 - -
Accr1g00091 271 PANTHER OS04G0555800 PROTEIN 1 271 - -
Accr1g00091 271 MobiDBLite consensus disorder prediction 243 271 - -
Accr1g00091 271 FunFam Zinc finger CCHC-type-containing 9 156 209 - -
Accr1g00091 271 ProSiteProfiles Zinc finger CCHC-type profile. 159 174 IPR001878 GO:0003676|GO:0008270
Accr1g00091 271 ProSiteProfiles Zinc finger CCHC-type profile. 132 146 IPR001878 GO:0003676|GO:0008270
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g00091 105 202 C2H2 Transcription Factor Family AT5G20220 28.696 9.90e-07 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g00091 - - adu:107466926 358.221