Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g00089 ATGGAGGCTCCAACTCTCACCGGATTGCTCAATCAAATCGCCGCCGAATTCCCCTCCCGTCGAGCCATCTCCGTCTCCGGCAAGTTCGATCTCACCTATTCTCGTCTTATCGAGCTCGTCGAACGTGCCGCCTCCCGTTTAGTCTCCTCCGGAATCAACGTCGGCGATGTTGTCGCTCTCACCTTCCCCAATACCGTCGAGTACGTCATAATGTTTTTGGCCGTGATTCGTGCACGAGCGACGGCTGCGCCGCTGAATGCAGCTTATACGGCGGAGGAGTTCGAGTTTTACTTGTCTGACTCGGAGTCGAAGCTCTTGCTGACGCCACAAGAAGGAAATGCTGCGGCTCAAGCGGCGGCTTCGAAGCTAAATATCCCTCACGCGACGGCTTCGCTTCCCAAAGCCGATGACGCCGAGGTCAGTCTCTCTCTGACTCAGAACGAGTCAAAATCGGAATCGGCCGCCGAACTCGTTAACGACCCTTCCGACGTGGCCCTATTCCTCCACACCTCTGGCACGACAAGCCGGCCCAAAGGAGTGCCTCTAACTCAGCACAACTTAGCCGCATCGGTTCAGAACATAAAGTCCGTGTACAGATTCACTGAGTCCGACTCAACGGTGATCGTTCTGCCACTCTTTCACGTCCACGGACTCATCGCGGGATTACTGAGTTCACTCATATCCGGTGCCGCCGTAGCGCTGCCGGCGGCAGGCCGTTTCTCAGCCTCCACGTTTTGGGCGGACATGATGAATTACAACGCGACGTGGTATACGGCGGTCCCTACCATACACCAGATCATACTGGATCGTCACTCGACCAAACCTGAACCGCACCCGAAACTGAGGTTTATTCGCAGTTGTAGCGCGTCGCTGGCACCGATCATATTGGGTCGGCTGGAGGAGGCATTTGGAGCCCCAGTTTTGGAGGCGTATGCAATGACGGAAGCGTCCCATCAAATGTCATCAAACCCGCTGCCGGATGAGGGGCCGCACAAGCCCGGGTCGGTTGGGAAATCGGTGGGTCTAGAAATGGCGATACTGAACGAGAAGGGAGAGATTCAGAAGGCTGAAATGAAAGGAGAGGTGTGTATTAGGGGTCCGAATGTGACAAAAGGGTACAAAAACAACCCAGCGAGCAATAAAACAGCGTTTGAATTTGGATGGTTTCATACGGGTGATATCGGGTTTTTTGATTCAGAAGGTTATTTGCATCTGGTGGGACGAATCAAGGAGCTCATTAATCGCGGAGGGGAGAAGATATCGCCCATAGAAGTGGATGCGGTGTTACTATCTCATCCGGATATTGCTCAGGCGGTTGCGTTTGGAGTCCCAGACGACAAGTATGGCGAAGAGATAAACTGTGCAGTGATAGCAAGGGAAGGATCAGAAATTGACGAGGAAGAGGTGTTAAAGTTTTGTAAGAAGAATCTTGCATCCTTCAAAGTCCCCAAGAAGGTTTTCATCACTGATTCTATGCCAAAGACTGCCACCGGCAAGATCCTACGCCGTCTTGTTGCCGAAAAATTCGTTTCTCAAAAGTGA 1542 0.5259 MEAPTLTGLLNQIAAEFPSRRAISVSGKFDLTYSRLIELVERAASRLVSSGINVGDVVALTFPNTVEYVIMFLAVIRARATAAPLNAAYTAEEFEFYLSDSESKLLLTPQEGNAAAQAAASKLNIPHATASLPKADDAEVSLSLTQNESKSESAAELVNDPSDVALFLHTSGTTSRPKGVPLTQHNLAASVQNIKSVYRFTESDSTVIVLPLFHVHGLIAGLLSSLISGAAVALPAAGRFSASTFWADMMNYNATWYTAVPTIHQIILDRHSTKPEPHPKLRFIRSCSASLAPIILGRLEEAFGAPVLEAYAMTEASHQMSSNPLPDEGPHKPGSVGKSVGLEMAILNEKGEIQKAEMKGEVCIRGPNVTKGYKNNPASNKTAFEFGWFHTGDIGFFDSEGYLHLVGRIKELINRGGEKISPIEVDAVLLSHPDIAQAVAFGVPDDKYGEEINCAVIAREGSEIDEEEVLKFCKKNLASFKVPKKVFITDSMPKTATGKILRRLVAEKFVSQK 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g00089 513 FunFam Peroxisomal-coenzyme A synthetase 5 408 - -
Accr1g00089 513 Gene3D - 409 511 IPR045851 -
Accr1g00089 513 SUPERFAMILY Acetyl-CoA synthetase-like 5 510 - -
Accr1g00089 513 CDD FACL_fum10p_like 18 507 IPR045310 GO:0016874
Accr1g00089 513 ProSitePatterns Putative AMP-binding domain signature. 167 178 IPR020845 -
Accr1g00089 513 FunFam 4-coumarate--CoA ligase 2 411 512 - -
Accr1g00089 513 Pfam AMP-binding enzyme 12 415 IPR000873 -
Accr1g00089 513 Pfam AMP-binding enzyme C-terminal domain 424 499 IPR025110 -
Accr1g00089 513 Gene3D - 5 408 IPR042099 -
Accr1g00089 513 PANTHER ACYL-COA SYNTHETASE 5 511 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g00089 Accr-Chr1 1865934 1871004 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g00089 5 512 Monolignol Biosynthesis Gene Families AT4G05160 31.107 3.64e-61 208
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g00089 K22133 - qsa:O6P43_004296 804.283
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr1g00089 1 1865934 1871004 Accr1g00089 1 1865934 1871004 ECH