Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g00079 ATGGCTCCTAAGCAGCCAAATACGGGTCTTTTCGTCGGATTGAACAAGGGTCATGTGCTGACCAAGAAGGAATTGGCTCCACGTCCATCAGATCGCAAGGGGAAAACAAGCAAGCGTGTCCACTTTGTGAGGTCGTTGATACGTGAGGTTGCAGGATTCGCTCCATATGAGAAACGTATAACTGAGCTTCTCAAGGTTGGTAAAGATAAAAGAGCATTGAAGGTGGCCAAGAGGAGGTTAGGCACTCACAAGAGGGCAAAGAAGAAGAGAGAGGAGATGTCCAATGCTCTCCGGAAGATGAGGGCCGGTGGAGGTGGAGAGAAGAAGAAGGCCTAA 336 0.494 MAPKQPNTGLFVGLNKGHVLTKKELAPRPSDRKGKTSKRVHFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRRLGTHKRAKKKREEMSNALRKMRAGGGGEKKKA 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g00079 111 Pfam Ribosomal protein L36e 8 101 IPR000509 GO:0003735|GO:0005840|GO:0006412
Accr1g00079 111 PANTHER 60S RIBOSOMAL PROTEIN L36 1 107 IPR000509 GO:0003735|GO:0005840|GO:0006412
Accr1g00079 111 FunFam 60S ribosomal protein L36 1 106 - -
Accr1g00079 111 MobiDBLite consensus disorder prediction 1 38 - -
Accr1g00079 111 Gene3D 60S ribosomal protein L36 1 106 IPR038097 -
Accr1g00079 111 MobiDBLite consensus disorder prediction 87 111 - -
Accr1g00079 111 MobiDBLite consensus disorder prediction 80 111 - -
Accr1g00079 111 ProSitePatterns Ribosomal protein L36e signature. 55 65 IPR000509 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g00079 Accr-Chr1 1637111 1638172 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g00079 1 110 Cytoplasmic Ribosomal Protein Gene Family AT3G53740 79.464 4.95e-57 170
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g00079 K02920 - mnt:21389936 215.698