Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g00071 ATGCCAGTTGAAAAACACAAGGTTTTTGGCACTCCAGATGTCATGAAAGCAGAGGATGGAAATGACTTCATAGAAACCGCACTCAGAAAGGCAATTGAACTGCCAGGCTGGCCGTTGCTCTCTCCTCTGAAGATTCAGTTGCAGAAGTGTGAAAAGTGTTCCCGAGAATTCTGCTCTTCAATTAATTATAGAAGACATATACGTGCTCACCATCGGTTGAAAAAGACTGATAAGGATTCAACAAAAAATAGAGATATGTTAGGAGCATATTGGGATAAGCTATCTGTAGAAGAGGCAAAAGAAGCTGTATCATTCAAGAATGTAATGCTAGAGGAAGTTCCGGGGTCTTCTATTTTAAAAGCGCTGACAAATCTTGTCCGAAAACAAGGGTTTTCTTCGCTTCCACAGAATTATCTGAAGGCTGGTTCTGCACTTTTGGATATTGTTCAAGCTAGATCCTCCATTCTTTCCTTATCTTCCAAGGAGTTTTTCAGTATCCTTGATAGTGCCAGTGAAAAAACATTTTTATGTGGGGCAGCAGTGTCAATGCAAAGATATATTTTTGATGGAGAACCGGGGAAGATTGGGCTTGAATCAAAAAACCTAGTTGCTTGTGCTAGTTTCTTGCTAGAACAAAAATTGGTTAAGGCATGGCTTGCTGACAAGGAAGCTGAAGCATTAAGATGGGAGAAGCTGCTAGTGGAGGAGGAAGAAGCTGCTCTGAAAAGACAAGTTGAGATTTTGGAGAGGAAGCGCCAGAAAAAGCTTAGGCAAAAAGAACAAAAGGCAAGGGGGCAAAAGCTTGAGGATGAGGCAGGAATGGAAAAGAATGGCACCAGCACAGCAGCTGACAGTTCATTGGCAGAAGCATTTCCAGATACACGTATGGCAGAAGCATTTCCAGATACACATAACTCTGGAGAACATAGTCCAGATACATTTGCAGTCCATGGTCCTTCACCAACTGTGCCCTTCCATTGCACAGATACTAATGAAGGTGCGGATGGGGATTCTCTGTCAGTGTATGATTGTGGCACTGATCAGAAGATCGAGCAAGAGACATCCCAAGGACATGTTTGTCAACACGTTGTGGTTGCTCAACCAAAAGCACAATGGGCTGTAGCTAATGGTTTTCATGCAAATCATAACTCTCAATTTTCCAAGCCTGGAGTCATTCAGAAGTATGAGAGCCACCGCAATCAAAAGGCTGGTCCCATGCTTAATGGTAACAAAGTATGGAGCCGAAAGCATAAGCAAAAAATTATTGAGGTACATTCAAAAGCCAGACTAGAGAAAGAACCAGATGAGGGTAAAAATCACGAAGTTTTAATAGGGTCTATATCTGTTACTCTTGGAAATTGCAGCCAAACAGAGGATAATGTGGTGGAATCTGGAGAGGGCTGCATGGTGGGGAATTCAACCAAGCATAGTAATGCTCGGGAGAAGCCATTCAAACCTCATTCTGCACAGATTGGTAACAATCATTTGTTAGTTAAGGCTGCTAAGCTTTGGAGGCCAGTCACTCATGGAACTAGATATTCATTACCACTTCCCAGTGCTGGTCCAGAAGCTGATACAATAGATGGAAAAAAAGATGATCAAAATTCTTTAAGGCCGTGTGACTCAGGTATTAGTGATAGTAGTTTTGGGAATAATTCCTCCCATCTAGAGGGCCAAGTGGGTCCAAGAAACTTGCAGTTTTCTAGTCAAGCTGCCAAAGCCTTTCTTGCAGAAAGATGGAAAAAAGCTGTATCGTCAAGCCATGTGAAATTGGTTCTTTCACCTGACTGTGCACCTCCTAGGTGCCTGGAGGCACAAGATTGTGAACTAGCTGCATGTCAATCTTCAAATATTGACAAATGCTGCATTTTGGCAAGTGCAGAGACTCGGGTGCCTGCAACCTCATCTAAATCCAAAATCAGAATGAAGCCCGAAAGGGGTGTCAAGATAAAGTACATTGCCAAACAAAGAACAGCTACTTAA 1983 0.4251 MPVEKHKVFGTPDVMKAEDGNDFIETALRKAIELPGWPLLSPLKIQLQKCEKCSREFCSSINYRRHIRAHHRLKKTDKDSTKNRDMLGAYWDKLSVEEAKEAVSFKNVMLEEVPGSSILKALTNLVRKQGFSSLPQNYLKAGSALLDIVQARSSILSLSSKEFFSILDSASEKTFLCGAAVSMQRYIFDGEPGKIGLESKNLVACASFLLEQKLVKAWLADKEAEALRWEKLLVEEEEAALKRQVEILERKRQKKLRQKEQKARGQKLEDEAGMEKNGTSTAADSSLAEAFPDTRMAEAFPDTHNSGEHSPDTFAVHGPSPTVPFHCTDTNEGADGDSLSVYDCGTDQKIEQETSQGHVCQHVVVAQPKAQWAVANGFHANHNSQFSKPGVIQKYESHRNQKAGPMLNGNKVWSRKHKQKIIEVHSKARLEKEPDEGKNHEVLIGSISVTLGNCSQTEDNVVESGEGCMVGNSTKHSNAREKPFKPHSAQIGNNHLLVKAAKLWRPVTHGTRYSLPLPSAGPEADTIDGKKDDQNSLRPCDSGISDSSFGNNSSHLEGQVGPRNLQFSSQAAKAFLAERWKKAVSSSHVKLVLSPDCAPPRCLEAQDCELAACQSSNIDKCCILASAETRVPATSSKSKIRMKPERGVKIKYIAKQRTAT 660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g00071 660 ProSiteProfiles Zinc finger C2H2 type domain profile. 48 75 IPR013087 -
Accr1g00071 660 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 30 659 - -
Accr1g00071 660 Coils Coil 219 258 - -
Accr1g00071 660 MobiDBLite consensus disorder prediction 515 561 - -
Accr1g00071 660 MobiDBLite consensus disorder prediction 252 285 - -
Accr1g00071 660 MobiDBLite consensus disorder prediction 538 561 - -
Accr1g00071 660 ProSitePatterns Zinc finger C2H2 type domain signature. 50 71 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g00071 Accr-Chr1 1580388 1584841 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g00071 18 657 C2H2 Transcription Factor Family AT4G25610 38.981 1.41e-127 387
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Accr1g00071 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g00071 - - gmx:100799153 691.034