Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g00070 ATGCCAGTTGAAAAACACAAGGTTTTTGGCACTCCAGATGTCATGAAAGCAGAGGATGGAAATGACTTCATAGAAACCGCACTCAGAAAGGCAATTGGCTGGCCGTTGCTCTCTCCTCTGAAGATTCAGTTGCAGAAGTGTGAAAAGTGTTCCCGAGAATTCTGCTCTTCAATTAATTATAGAAGACATATACGTGCTCACCATCGGTTGAAAAAGACTGATAAGGATTCAACAAAAAATAGAGATATGTTAGGAGCATATTGGGATAAGCTATCTGTAGAAGAGGCAAAAGAAGCTGTATCATTCAAGAATGTAATGCTAGAGGAAGTTCCGGGGTCTTCTATTTTAAAAGCGCTGACAAATCTTGTCCGAAAACAAGGGTTTTCTTCGCTTCCACAGAATTATCTGAAGGCTGGTTCTGCACTTTTGGATATTGTTCAAGCTAGATCCTCCATTCTTTCCTTATCTTCCAAGGAGTTTTTCAGTATCCTTGATAGTGCCAGTGAAAAAACATTTTTATGTGGGGCAGCAGTGTCAATGCAAAGATATATTTTTGATGGAGAACCGGGGAAGATTGGGCTTGAATCAAAAAACCTAGTTGCTTGTGCTAGTTTCTTGCTAGAACAAAAATTGGTTAAGGCATGGCTTGCTGACAAGGAAGCTGAAGCATTAAGATGGGAGAAGCTGCTAGTGGAGGAGGAAGAAGCTGCTCTGAAAAGACAAGTTGAGATTTTGGAGAGGAAGCGCCAGAAAAAGCTTAGGCAAAAAGAACAAAAGGCAAGGGGGCAAAAGCTTGAGGATGAGGCAGGAATGGAAAAGAATGGCACCAGCACAGCAGCTGACAGTTCATTGGCAGAAGCATTTCCAGATACACGTATGGCAGAAGCATTTCCAGATACACATAACTCTGGAGAACATAGTCCAGATACATTTGCAGTCCATGGTCCTTCACCAACTGTGCCCTTCCATTGCACAGATACTAATGAAGGTGCGGATGGGGATTCTCTGTCAGTGTATGATTGTGGCACTGATCAGAAGATCGAGCAAGAGACATCCCAAGGACATGTTTGTCAACACGTTGTGGTTGCTCAACCAAAAGCACAATGGGCTGTAGCTAATGGTTTTCATGCAAATCATAACTCTCAATTTTCCAAGCCTGGAGTCATTCAGAAGTATGAGAGCCACCGCAATCAAAAGGCTGGTCCCATGCTTAATGGTAACAAAGTATGGAGCCGAAAGCATAAGCAAAAAATTATTGAGGTACATTCAAAAGCCAGACTAGAGAAAGAACCAGATGAGGGTAAAAATCACGAAGTTTTAATAGGGTCTATATCTGTTACTCTTGGAAATTGCAGCCAAACAGAGGATAATGTGGTGGAATCTGGAGAGGGCTGCATGGTGGGGAATTCAACCAAGCATAGTAATGCTCGGGAGAAGCCATTCAAACCTCATTCTGCACAGATTGGTAACAATCATTTGTTAGTTAAGGCTGCTAAGCTTTGGAGGCCAGTCACTCATGGAACTAGATATTCATTACCACTTCCCAGTGCTGGTCCAGAAGCTGATACAATAGATGGAAAAAAAGATGATCAAAATTCTTTAAGGCCGTGTGACTCAGGTATTAGTGATAGTAGTTTTGGGAATAATTCCTCCCATCTAGAGGGCCAAGTGGGTCCAAGAAACTTGCAGTTTTCTAGTCAAGCTGCCAAAGCCTTTCTTGCAGAAAGATGGAAAAAAGCTGTATCGTCAAGCCATGTGAAATTGGTTCTTTCACCTGACTGTGCACCTCCTAGGTGCCTGGAGGCACAAGATTGTGAACTAGCTGCATGTCAATCTTCAAATATTGACAAATGCTGCATTTTGGCAAGTGCAGAGACTCGGGTGCCTGCAACCTCATCTAAATCCAAAATCAGAATGAAGCCCGAAAGGGGTGTCAAGATAAAGTACATTGCCAAACAAAGAACAGCTACTTAA 1974 0.4245 MPVEKHKVFGTPDVMKAEDGNDFIETALRKAIGWPLLSPLKIQLQKCEKCSREFCSSINYRRHIRAHHRLKKTDKDSTKNRDMLGAYWDKLSVEEAKEAVSFKNVMLEEVPGSSILKALTNLVRKQGFSSLPQNYLKAGSALLDIVQARSSILSLSSKEFFSILDSASEKTFLCGAAVSMQRYIFDGEPGKIGLESKNLVACASFLLEQKLVKAWLADKEAEALRWEKLLVEEEEAALKRQVEILERKRQKKLRQKEQKARGQKLEDEAGMEKNGTSTAADSSLAEAFPDTRMAEAFPDTHNSGEHSPDTFAVHGPSPTVPFHCTDTNEGADGDSLSVYDCGTDQKIEQETSQGHVCQHVVVAQPKAQWAVANGFHANHNSQFSKPGVIQKYESHRNQKAGPMLNGNKVWSRKHKQKIIEVHSKARLEKEPDEGKNHEVLIGSISVTLGNCSQTEDNVVESGEGCMVGNSTKHSNAREKPFKPHSAQIGNNHLLVKAAKLWRPVTHGTRYSLPLPSAGPEADTIDGKKDDQNSLRPCDSGISDSSFGNNSSHLEGQVGPRNLQFSSQAAKAFLAERWKKAVSSSHVKLVLSPDCAPPRCLEAQDCELAACQSSNIDKCCILASAETRVPATSSKSKIRMKPERGVKIKYIAKQRTAT 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g00070 657 MobiDBLite consensus disorder prediction 512 558 - -
Accr1g00070 657 ProSiteProfiles Zinc finger C2H2 type domain profile. 45 72 IPR013087 -
Accr1g00070 657 MobiDBLite consensus disorder prediction 535 558 - -
Accr1g00070 657 ProSitePatterns Zinc finger C2H2 type domain signature. 47 68 IPR013087 -
Accr1g00070 657 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 33 656 - -
Accr1g00070 657 MobiDBLite consensus disorder prediction 249 282 - -
Accr1g00070 657 Coils Coil 216 255 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g00070 Accr-Chr1 1580388 1584841 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g00070 18 654 C2H2 Transcription Factor Family AT4G25610 38.681 1.05e-125 382
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Accr1g00070 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g00070 - - gmx:100799153 683.715
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr1g00070 1 1580388 1584841 Accr1g00070 1 1580388 1584841 ECH