Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g00069 ATGCCAGTTGAAAAACACAAGGTTTTTGGCACTCCAGATGTCATGAAAGCAGAGGATGGAAATGACTTCATAGAAACCGCACTCAGAAAGGCAATTGAACTGCCAGGCTGGCCGTTGCTCTCTCCTCTGAAGATTCAGTTGCAGAAGTGTGAAAAGTGTTCCCGAGAATTCTGCTCTTCAATTAATTATAGAAGACATATACGTGCTCACCATCGGTTGAAAAAGACTGATAAGGATTCAACAAAAAATAGAGATATGTTAGGAGCATATTGGGATAAGCTATCTGTAGAAGAGGCAAAAGAAGCTGTATCATTCAAGAATGTAATGCTAGAGGAAGTTCCGGGGTCTTCTATTTTAAAAGCGCTGACAAATCTTGTCCGAAAACAAGGGTTTTCTTCGCTTCCACAGAATTATCTGAAGGCTGGTTCTGCACTTTTGGATATTGTTCAAGCTAGATCCTCCATTCTTTCCTTATCTTCCAAGGAGTTTTTCAGTATCCTTGATAGTGCCAGTGAAAAAACATTTTTATGTGGGGCAGCAGTGTCAATGCAAAGATATATTTTTGATGGAGAACCGGGGAAGATTGGGCTTGAATCAAAAAACCTAGTTGCTTGTGCTAGTTTCTTGCTAGAACAAAAATTGGTTAAGGCATGGCTTGCTGACAAGGAAGCTGAAGCATTAAGATGGGAGAAGCTGCTAGTGGAGGAGGAAGAAGCTGCTCTGAAAAGACAAGTTGAGATTTTGGAGAGGAAGCGCCAGAAAAAGCTTAGGCAAAAAGAACAAAAGGCAAGGGGGCAAAAGCTTGAGGATGAGGCAGGAATGGAAAAGAATGGCACCAGCACAGCAGCTGACAGTTCATTGGCAGAAGCATTTCCAGATACACGTATGGCAGAAGCATTTCCAGATACACATAACTCTGGAGAACATAGTCCAGATACATTTGCAGTCCATGGTCCTTCACCAACTGTGCCCTTCCATTGCACAGATACTAATGAAGGTGCGGATGGGGATTCTCTGTCAGTGTATGATTGTGGCACTGATCAGAAGATCGAGCAAGAGACATCCCAAGGACATGTTTGTCAACACGTTGTGGTTGCTCAACCAAAAGCACAATGGGCTGTAGCTAATGGTTTTCATGCAAATCATAACTCTCAATTTTCCAAGCCTGGAGTCATTCAGAAGTATGAGAGCCACCGCAATCAAAAGGCTGGTCCCATGCTTAATGGTAACAAAGTATGGAGCCGAAAGCATAAGCAAAAAATTATTGAGGTACATTCAAAAGCCAGACTAGAGAAAGAACCAGATGAGGGTAAAAATCACGAAGTTTTAATAGGGTCTATATCTGTTACTCTTGGAAATTGCAGCCAAACAGAGGATAATGTGGTGGAATCTGGAGAGGGCTGCATGGTGGGGAATTCAACCAAGCATAGTAATGCTCGGGAGAAGCCATTCAAACCTCATTCTGCACAGATTGGTAACAATCATTTGTTAGTTAAGGCTGCTAAGCTTTGGAGGCCAGTCACTCATGGAACTAGATATTCATTACCACTTCCCAGTGCTGGTCCAGAAGCTGATACAATAGATGGAAAAAAAGATGATCAAAATTCTTTAAGGCCGTGTGACTCAGGTATTAGTGATAGTAGTTTTGGGAATAATTCCTCCCATCTAGAGGGCCAAGTGGGTCCAAGAAACTTGCAGTTTTCTAGTCAAGCTGCCAAAGCCTTTCTTGCAGAAAGATGGAAAAAAGCTGTATCGTCAAGCCATGTGAAATTGGTTCTTTCACCTGACTGTGCACCTCCTAGGTGCCTGGAGGCACAAGATTGTGAACTAGCTGCATGTCAATCTTCAAATATTGACAAATGCTGCATTTTGGCAAGTGCAGAGACTCGGGTGCCTGCAACCTCATCTAAATCCAAAATCAGAATGAAGCCCGAAAGGGGTGTCAAGATAAAAGGTTCCAGTTTTACTGATGGTCTTCTGTCAGAAAATTGA 1992 0.4252 MPVEKHKVFGTPDVMKAEDGNDFIETALRKAIELPGWPLLSPLKIQLQKCEKCSREFCSSINYRRHIRAHHRLKKTDKDSTKNRDMLGAYWDKLSVEEAKEAVSFKNVMLEEVPGSSILKALTNLVRKQGFSSLPQNYLKAGSALLDIVQARSSILSLSSKEFFSILDSASEKTFLCGAAVSMQRYIFDGEPGKIGLESKNLVACASFLLEQKLVKAWLADKEAEALRWEKLLVEEEEAALKRQVEILERKRQKKLRQKEQKARGQKLEDEAGMEKNGTSTAADSSLAEAFPDTRMAEAFPDTHNSGEHSPDTFAVHGPSPTVPFHCTDTNEGADGDSLSVYDCGTDQKIEQETSQGHVCQHVVVAQPKAQWAVANGFHANHNSQFSKPGVIQKYESHRNQKAGPMLNGNKVWSRKHKQKIIEVHSKARLEKEPDEGKNHEVLIGSISVTLGNCSQTEDNVVESGEGCMVGNSTKHSNAREKPFKPHSAQIGNNHLLVKAAKLWRPVTHGTRYSLPLPSAGPEADTIDGKKDDQNSLRPCDSGISDSSFGNNSSHLEGQVGPRNLQFSSQAAKAFLAERWKKAVSSSHVKLVLSPDCAPPRCLEAQDCELAACQSSNIDKCCILASAETRVPATSSKSKIRMKPERGVKIKGSSFTDGLLSEN 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g00069 663 ProSiteProfiles Zinc finger C2H2 type domain profile. 48 75 IPR013087 -
Accr1g00069 663 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 31 651 - -
Accr1g00069 663 Coils Coil 219 258 - -
Accr1g00069 663 MobiDBLite consensus disorder prediction 515 561 - -
Accr1g00069 663 MobiDBLite consensus disorder prediction 252 285 - -
Accr1g00069 663 MobiDBLite consensus disorder prediction 538 561 - -
Accr1g00069 663 ProSitePatterns Zinc finger C2H2 type domain signature. 50 71 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g00069 Accr-Chr1 1580258 1584841 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g00069 18 651 C2H2 Transcription Factor Family AT4G25610 38.729 1.36e-123 377
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Accr1g00069 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g00069 - - gmx:100799153 679.478