Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g00065 ATGCCTTCATGGTGGGGGAAATCATCGTCAAAAGAAACCAAGAAGAAAGGAGGTAAAGAAAGTTTATTTGATGCATTACAAAGAAAGCTTAAAATCCCATCTGAAGGTAAGGTAAGCAATAGGTCTCGAGGACCTCGGAAAAACTGCAATGACACTATTTCAGAGAAGGGGGCTCAGTCTCCAGTTGAATCAAGGTCTCCTTCACCATCCAAAGTAGCACGGTGTCAAAGTTTTGCTGAAAGGTCTCTTGCCCAGCCACTGCCACTTCCTGTAGGGCATCCTTCATGTATAGGACGAACAGAGTCTGAAATTAGCGTATCAACAAAGTCAAGAGGGGAGAGGGTTTCCAAGAAATCATTGTACTTGCCACTCCCAAGACCTGCATGCATACGTAGTAGGCCTAACCCTGCAGATTTAGATGGAGACCCTATTACTGCCTCTGTATGTAGTGAAAGCTCTGCTGATAGTGATGATCCAGCTGATTCTTGTCTACGCAGTCCACTGGCAACTGACTCGGAGACTGGGACTAGAACTGCTGCTGGCAGCCCTTCCAGCTCAATGCTCAAGGATCAATCATCTACTGGTTTGCAACTAAATTCAAGAGAGGTTCCTCCTCATGGTGCTGTCTTTAGTGCTCCTGACAGCTCCAAGTCAAGTCCATCAAGAAGTCCATTGAGAGCATTTGGCACAGAACAAGTGCTGAGCTCTGCTTTTTGGGCTGGGAAGCAATATTCGGAGGTCAATTTTATTGGATCTGGGCACTGCTCCAGTCCAGGTTCTGGTCAGAACTCTGGACATAATTCAATGGGAGGGGACATGACAGGACAGATATTTTGGCAACCAAGTAGGGGTAGCCCTGAGTATTCTCCTGTTGTTAGCCCCAGAATGACCAGTCCTGGCCCTAGCTCTAGGATTCAAAGTGGAGCTGTCACACCCATTCATCCTAGAGCTGGGGCAACACCCACTGAATCACAGACTGGATGGATTGATGAAGGGAAACAACAGAGTCATCGTCTACCTCTTCCGCCCCTAACAGTTACCCATTCCTCACCTTTCTCTCATTCAAATTCAGCAGCAACATCTCCATCTATGCCAAGAAGTCCTGGAAGAGCAGATAATCCTTTGAGTCCTGGCTCTCGATGGAAAAAAGGGAAGCTGCTGGGAAGAGGCACATTTGGACATGTTTATGTTGGCTTCAATAGTGAAAGTGGTGAGATGTGTGCAATGAAGGAGGTAACATTGTTTTCAGATGATGCCAAGTCCAAGGAAAGTGCAAAGCAATTGATGCAGGAAATTGCTCTATTAAGTCGTTTACGGCATCCCAATATTGTGCAGTATTATGGTTCTGAAACAGTAGATGACAAACTTTACATATACCTGGAGTATGTATCTGGAGGCTCCATATATAAACTTCTTCAAGAATATGGAAAATTTGGTGAACTAGCTATCCGTAACTATACCCAACAAATTTTGTCGGGGCTTGCTTATTTACATGCTAAAAATACTGTCCACAGGGACATCAAGGGAGCAAATATACTTGTAGATCAAAATGGCCGGGTAATCAAGTTGGCAGACTTTGGCATGGCAAAACATATAACGGGGCAGTCATGTCCACTATCATTCAAGGGAAGTCCTTATTGGATGGCTCCTGAGGTCATAAAGAACTCCAGTGGTTGCAACCTTGCTGTGGATATATGGAGTCTTGGTTGCACAGTTTTGGAGATGGCTACAACTAAGCCTCCTTGGAGTCAGTATGAAGGGGTTGCTGCCATGTTTAAGATTGGTAATAGCAAGGAACTCCCAACAATCCCAGATGACCTATCAAATGAAGGAAAGGATTTTGTTCGGAAATGTCTGCAACGTAATCCACATGATCGTCCTTCGGCCCAGCAACTACTGGAACACCCTTTTGTAAAATGTGCTGCACCTTTGGAAAGACCTATTCTGGGTGCTGAAACGTCAGATCAGGGGACTGGTATTGCGCATGGTGCAAAATCTCTGGGCGCCGGACAAGGCAGAAATCTCTCTGCCCTGGATAATGACAGACTTTCTGTTCATTCTTCTAGGATGTTGAAACTGAATCCGCATGCCAGTAATGAAGGCCATGTTCCAAGGAATATTTCTTGCCCTGTCTCTCCCATTGGAAGCCCACTTTTGCAGTCAAGATCACCTCAGCACATGAATGGGAGAATGTCTCCCTCTCCCATATCTAGCCCCCGCACGGTTTCTGGTGCATCCACGCCTCTCACTGGTGGTAGTGGTGCCATTCCATTTGGCAATCACCTGAAACAGTCAGCTTACTATCAAGAGGGTCTTGCAAACTTGCCAAAGCACTCAAATGGTATGTACTTTAGTGCCCCTGCTCATCACGACTCTGGCGTTGACATCTTTCGCAATCTGCAAATGGGGTCTCAAACAGAACTGATTCCAAGTGAAAATGATGTTCTGGGGAAGCATTTTGCGAGACCTCCTGTTGAGCCTTACGATGTTCAGTCAGTCTTGGCTGATCGTGTTTCCCGACAGCTATTGGGAGATCATGTTAAGATTAACCCGCCTCTGGATCTTAGTCCCAACTCTCCTTTGCTCAACAGGGCAAATGGCCTATGA 2607 0.4595 MPSWWGKSSSKETKKKGGKESLFDALQRKLKIPSEGKVSNRSRGPRKNCNDTISEKGAQSPVESRSPSPSKVARCQSFAERSLAQPLPLPVGHPSCIGRTESEISVSTKSRGERVSKKSLYLPLPRPACIRSRPNPADLDGDPITASVCSESSADSDDPADSCLRSPLATDSETGTRTAAGSPSSSMLKDQSSTGLQLNSREVPPHGAVFSAPDSSKSSPSRSPLRAFGTEQVLSSAFWAGKQYSEVNFIGSGHCSSPGSGQNSGHNSMGGDMTGQIFWQPSRGSPEYSPVVSPRMTSPGPSSRIQSGAVTPIHPRAGATPTESQTGWIDEGKQQSHRLPLPPLTVTHSSPFSHSNSAATSPSMPRSPGRADNPLSPGSRWKKGKLLGRGTFGHVYVGFNSESGEMCAMKEVTLFSDDAKSKESAKQLMQEIALLSRLRHPNIVQYYGSETVDDKLYIYLEYVSGGSIYKLLQEYGKFGELAIRNYTQQILSGLAYLHAKNTVHRDIKGANILVDQNGRVIKLADFGMAKHITGQSCPLSFKGSPYWMAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLSNEGKDFVRKCLQRNPHDRPSAQQLLEHPFVKCAAPLERPILGAETSDQGTGIAHGAKSLGAGQGRNLSALDNDRLSVHSSRMLKLNPHASNEGHVPRNISCPVSPIGSPLLQSRSPQHMNGRMSPSPISSPRTVSGASTPLTGGSGAIPFGNHLKQSAYYQEGLANLPKHSNGMYFSAPAHHDSGVDIFRNLQMGSQTELIPSENDVLGKHFARPPVEPYDVQSVLADRVSRQLLGDHVKINPPLDLSPNSPLLNRANGL 868
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g00065 868 MobiDBLite consensus disorder prediction 340 367 - -
Accr1g00065 868 CDD STKc_MEKK1_plant 380 638 - -
Accr1g00065 868 Pfam Protein kinase domain 382 638 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g00065 868 MobiDBLite consensus disorder prediction 318 332 - -
Accr1g00065 868 MobiDBLite consensus disorder prediction 9 50 - -
Accr1g00065 868 FunFam Mitogen-activated protein kinase kinase kinase 379 662 - -
Accr1g00065 868 MobiDBLite consensus disorder prediction 284 383 - -
Accr1g00065 868 ProSitePatterns Protein kinases ATP-binding region signature. 387 410 IPR017441 GO:0005524
Accr1g00065 868 Gene3D Transferase(Phosphotransferase) domain 1 379 656 - -
Accr1g00065 868 MobiDBLite consensus disorder prediction 167 200 - -
Accr1g00065 868 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 59 650 - -
Accr1g00065 868 MobiDBLite consensus disorder prediction 51 75 - -
Accr1g00065 868 MobiDBLite consensus disorder prediction 1 225 - -
Accr1g00065 868 ProSiteProfiles Protein kinase domain profile. 381 638 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g00065 868 SMART serkin_6 381 638 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g00065 868 MobiDBLite consensus disorder prediction 284 309 - -
Accr1g00065 868 SUPERFAMILY Protein kinase-like (PK-like) 379 744 IPR011009 -
Accr1g00065 868 MobiDBLite consensus disorder prediction 723 747 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g00065 Accr-Chr1 1549035 1554758 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g00065 1 857 MAP Kinase Kinase Kinase AT1G63700 56.887 0.0 847
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Accr1g00065 Pkinase 1.7e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g00065 K20717 - gmx:100792783 1357.43