Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g00060 ATGGCTTCAGACCTCTTGAAGCTGAAGATCTTAGAGAAAAGCCATGTGAGGCCCAAGAAAAAGCTGGGCAAGAAAGAGTGTCAGCTAGTGACCTTTGATCTTCCATACTTGGCCTTCTACTACAACCAGAAGCTTCTCTTCTACAAAGGCGATGACTTTGAGGGGATGGTGAAGAAGCTCAAAGAAGGGTTAAGTGTGGTTCTTGAGGAGTTTTATCAGCTCGCCGGGAAACTTGGGAAGGATGAAGAAGGGGTTTTCAGAGTTGAGTATGACGACGGAGACGACGGAGGAGAAGACGGTGGTGTTGTCGCTGGTGTGGAGGTCGTTGAAGCTAAAGCTGAAGCTGATGTTTCAGTGGCGGATCTAACTGTTGCAGAAAGCACAAACAGTTTGAAGGAGCTCATTCCTTATACTGGGATTCTCAATTTGGAAGGCATGCATAGGCCCTTGTTGGCCATTCAGTTAACAAAGCTGAGAGGCGGATTAGCAATGGGATGCGCCTTCAACCATGCAGTCCTTGATGGAACTTCCACGTGGCACTTCATGAGCTCATGGGCTGCAATCTGCTGCGGCGCGCCTACTGTTTCAGCATCACCGTTCCTTGAACGAACCAAGGCGCGTAACACGCGAGTGAAGCTTGACCTCTCACTCCCATCAGCGGACCCACTTGCTGCCAAATCCAACGGGGACGTTAAGCAGGCCCCACCGCCCCCGGTTCTTAGAGAGAAGATCTTCAAGTTCTCCGAGTCAGCCATCGATAAGATCAAGTCAACGGTCAACGGAAAACTTCCATCGGACGGCTCAAAACCATTCTCCACATTCCAAGCCCTCTCTGTCCATATCTGGCGCCATGTGACCCATGCACGTAACCTAAAACCCGAAGACTACACTGTCTTCACTGTCTTCGTTGACTGCCGGAAACGAGTCGAACCGCCGATGCCGGAGACCTACTTTGGAAACCTGATCCAGGCGATATTCACTGTCACGGCGGCTGGGTTGTTGTCAGTGAACCCGCCGGAGTTTGGGGCATCTCTGATTCAGAAGGCCATTGAAGGACACACTGCAAAGGCCATAGATGAGAGGAACAAGGAGTGGGAGAGTTCACCGAAGATTTTCCAGTTCAAAGACGCCGGCGTGAACTGCGTGGCGGTGGGAAGCTCGCCGAGGTTCAAGGTTTACGATGTGGATTTCGGGTGGGGCCCGGCAGAGATTGTGAGGAGTGGATCAAACAACAAGTTTGATGGGATGGTTTATCTGTATCCAGGTAAGAGTGGAGGGAGAAGCATCGATGTGGAACTGACCTTGGAGAGTGAAGCTATGGCGAAGTTGGAGGAGGACAAAGAGTTCCTCATGGAGGTTTAA 1362 0.511 MASDLLKLKILEKSHVRPKKKLGKKECQLVTFDLPYLAFYYNQKLLFYKGDDFEGMVKKLKEGLSVVLEEFYQLAGKLGKDEEGVFRVEYDDGDDGGEDGGVVAGVEVVEAKAEADVSVADLTVAESTNSLKELIPYTGILNLEGMHRPLLAIQLTKLRGGLAMGCAFNHAVLDGTSTWHFMSSWAAICCGAPTVSASPFLERTKARNTRVKLDLSLPSADPLAAKSNGDVKQAPPPPVLREKIFKFSESAIDKIKSTVNGKLPSDGSKPFSTFQALSVHIWRHVTHARNLKPEDYTVFTVFVDCRKRVEPPMPETYFGNLIQAIFTVTAAGLLSVNPPEFGASLIQKAIEGHTAKAIDERNKEWESSPKIFQFKDAGVNCVAVGSSPRFKVYDVDFGWGPAEIVRSGSNNKFDGMVYLYPGKSGGRSIDVELTLESEAMAKLEEDKEFLMEV 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g00060 453 Gene3D - 7 216 IPR023213 -
Accr1g00060 453 Gene3D - 221 445 IPR023213 -
Accr1g00060 453 FunFam Tryptamine hydroxycinnamoyl transferase 225 447 - -
Accr1g00060 453 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 10 450 - -
Accr1g00060 453 Pfam Transferase family 7 449 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g00060 Accr-Chr1 1506334 1509521 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g00060 6 453 Monolignol Biosynthesis Gene Families AT5G48930 26.124 3.89e-35 133
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g00060 K19747 - qsa:O6P43_008177 673.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr1g00060 1 1506334 1509521 Accr1g00060 1 1506334 1509521 ECH