Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g00056 ATGTCATCGCCGGGATTCACGGGTGGTGGAGCACCGGAGTACTACGGCGGAATTGGCCGATCCATGGCGGCAACCGCCATGAACGACCCTACCAACACTAACAATCTTCAACCTTCTCTTCATCGTCTGTACCGAACCCAGCAGCAGCAGCAACAACAACCAGCAATTTTTCTAGATCCTTACACGCAGATCGCAAGGCAAAATCCGAGTCTCATCGGGAAGCGAACCCTCGCAGAATTTCAAACTCATCAACAGAATCACAGCAATCAGGTCCTTTCAAACCTCCTTTTACGCTCTGTGAAGCCCAGAACTTTCCAGAATAGCTCTCCTCTGTCTCCTATGTCACCCATGGATTTCTCCATGTCCCCAGAATTGCCAAACCCTTCGGTTTTCTCGTCGCAGCGGTTTGGGTTACCTTTGCTTCAGCAATCTCGCCCACAGACGATGAATCTCCCAAACGCGGCCTTATCCAGAGCTGGATTTCCATATTTGAATGGTAATTTGGTTCAGGAAAGTGAGAAGAAGGTCATGGACCATCGGCTTCAGGAGTTGGAGAAACAGCTTTTGGAAGACAACGACGAGGAAGAAGGCGATGCGGTGTCTGTGATCACCGGCAGCGAGTGGTCCATCCAGAATCTGATCAGTCCCTCCGGCGCACAGAAACCAATTTCTTCGTCGCCTACTTCGTCTACAACCTCGACGACGTCGTCTTCTTCCTCTGTTCCTTCCCCTGCTTCCACCTGTTTGAAGCAGTCGTTAATGGAGGCCGCATCTGCAATTTCCGAAGGCAAATCCGACTCCGCTTTGGAGATCCTGACCCGTTTGGCCCAGTTATCATACCCGAACGGAAATTCGGATCAACGAGTGATGGATTGTATGGTTTCCGCGCTGAAATCTCGTGTGAACCCACAGGAAAACCCACCTGCGGTTAGAGAACTCTTCAGCAGCGAACACGCCGAGTCGACTCAGTTGCTCTACGAACATTCTCCGTGCTTCAAGGTTGGGTTCATGGCGGCCAATCTGGCAATCCTCGATGCCGCATTCGAGGACCCAACGGAGAACAACGGCGGCCACAAGTTACACGTGGTCGATTTTGACATCGGCAGGGGAAGGCAATACATACATCTCCTCCACGACCTCTCGGCGCGTCAGAATGGAAAACTAGTCACGGTGCACATCACGGCGGTTGCGGAGAACGACAGTGAAGAGATGTTGAAGATGGTGGGTGATATGTTAAGACAAGAAGCGGAGCAACTCGGAGTCGGGTTCGAGTTCAGAGCAATAACCCAACGACTCACCGAGTTAACGCGTGAGTCACTAGGGTGCGAGCCAGGCGAGCCACTGGCAGTGAATTTCGCTTTCAAATTGTACAGAATGGCCGACGAAAGCGTTTCAACAGAGAACCCACGAGACGACCTTCTCCGGCGCGTGAAAGGGTTGGCCCCGCGCGTGGTGACGCTGGTGGAGCAAGAGATAAACACCAATACGGCGCCGTTAACGTCCCGCGTTTCCGAGTCGTTCTCGTATTACGGCGCGCTATTTGATTCGCTCGAGTCAACCATGCCAAGAGACCAACCAGAGCGAGTGAAGCTGGAACAAGGACTGAGTCGAAAGATTAGAAACTCGATCGCGTGCGAAGGAAGAGATCGCGTGGAAAGGTGCGAAGTATTTGGGAAGTGGAAGGCCCGTGCAACCATGGCGGGTTTTCAACTGAAGGGAATGAATCAGAGAATCGCCGAGATGGTTAAAGCGCGATTCAACCCGGTGAACCGAGTCAACCCGGGATTCACAGTGAAGGAAGAGAATGGTGGGATTTGCTTTGGTTGGATGGGTCGAACACTCACCGTCGCATCTGCTTGGCGTTAA 1866 0.5241 MSSPGFTGGGAPEYYGGIGRSMAATAMNDPTNTNNLQPSLHRLYRTQQQQQQQPAIFLDPYTQIARQNPSLIGKRTLAEFQTHQQNHSNQVLSNLLLRSVKPRTFQNSSPLSPMSPMDFSMSPELPNPSVFSSQRFGLPLLQQSRPQTMNLPNAALSRAGFPYLNGNLVQESEKKVMDHRLQELEKQLLEDNDEEEGDAVSVITGSEWSIQNLISPSGAQKPISSSPTSSTTSTTSSSSSVPSPASTCLKQSLMEAASAISEGKSDSALEILTRLAQLSYPNGNSDQRVMDCMVSALKSRVNPQENPPAVRELFSSEHAESTQLLYEHSPCFKVGFMAANLAILDAAFEDPTENNGGHKLHVVDFDIGRGRQYIHLLHDLSARQNGKLVTVHITAVAENDSEEMLKMVGDMLRQEAEQLGVGFEFRAITQRLTELTRESLGCEPGEPLAVNFAFKLYRMADESVSTENPRDDLLRRVKGLAPRVVTLVEQEINTNTAPLTSRVSESFSYYGALFDSLESTMPRDQPERVKLEQGLSRKIRNSIACEGRDRVERCEVFGKWKARATMAGFQLKGMNQRIAEMVKARFNPVNRVNPGFTVKEENGGICFGWMGRTLTVASAWR 621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g00056 621 ProSiteProfiles GRAS family profile. 240 621 IPR005202 -
Accr1g00056 621 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 215 609 IPR005202 -
Accr1g00056 621 Pfam GRAS domain family 249 621 IPR005202 -
Accr1g00056 621 Coils Coil 174 194 - -
Accr1g00056 621 MobiDBLite consensus disorder prediction 216 246 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g00056 Accr-Chr1 1418755 1420620 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g00056 50 621 GRAS Transcription Factor Family AT5G52510 49.919 1.33e-166 488
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Accr1g00056 GRAS 4.7e-103 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g00056 - - qsa:O6P43_008171 745.732
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr1g00056 1 1418755 1420620 Accr1g00056 1 1418755 1420620 ECH