Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g00050 ATGCTCCAAAACTTTCCTTCCATGGCACCTCCTCAAATGCTTGTTCTACCTTTAATTCTTCTTGTTTCCCTTATTCCTTCCTCGTTTTCTTTCACTCCTGTGGATAATTATCTTCTCAACTGTGGATCACATGCAAATGCATCACTCTTCAACCGAATCTTCACGGGCGATTCCACGAAACCCGGTTCGGATTATCTTGCCGCGGGTAAATCTATTACGCTTGCGAACCAAAATTCGCCTCCGAATTCTCCCACTCTGTATCAGACAGCCAGAGTTTTCACGAGCACAGGGAGCTACAGGTTTCATATGAAGAGTAACGGTATTCATTTGGTACGTTTTCATTTCTCGCCCTTTTCAGCTCAAGGTTTTGATTTAAAATCCGCCAAGTTTAGTGTTCTGGTTGGTGGAAATACGCTTGTGAAAGAGTTTCAGTTGCGTAATGGCACGTTGATTAAGGAGTATATATTGAAGATTGAATCAAATCTGCTCGAAATAGAGTTTGAACCTGTGGGTGATTCGGGTTTTGGGTTTGTCAATGCTTTGGAGGTATTTACAGCCCCTGTGGATTTCATTCTTGATTATGGAGCTAGGTTAGTGGATTCTTCTGGAGTTGAAGAGTACAGGAATCTTTCATCTCAGGTTTTAGAGACAGTTTATAGAATTAATGTTGGTGGCTCGAAAATAACTCCTTTCAATGACACACTCTGGAGGACTTGGATTCCAGATGATGATTATTTGGTGTTTAAGGAAGCAGCTAAACGTGTGGCTAGCACTCACACACCAAATTATCAAAAGGGAGGTGCAACCCCCGAGATCGCTCCTGATAATGTTTATATGACTGCCCAGGAGATGAATCGAGACACCTCAAGCCTGGCTTCCAGGTTCAACATAACTTGGAAATTTCAGGTGGCTCCGGCCGTCGGTGGTGGTGGTGTTCGGCACTTGGTTCGGTTGCATTTCTGTGATATTGTTAGCTCTGCATTGAACTTGCTGTACTTTGATGTGTATATTAATGGCTACTCTGCATACAAGGATCTTGATCTGTCATCTCTTACTGTCCATGTTCTTGCATCTCCAATCTATGTGGATTTTGTTGTAGATTCTGATGATTCAGGTTCTATTGAAATAAGTGTTGGTCCTTCTGATCTGTCCAGTGTGATGAGGATGAATGCCTTGTTGAATGGCGCAGAGATCATGAAGATGGTCAATGTTATGGATTCACATGTTGTTCATAAAAGAAAAATATTATGGATATTGGTGGGCTCTATTGTTGGAGGAGTTGTACTACTTTCGGTAGTGGTTGGTCTTCTTGCTTTTATGTGCAGGAAGAGGAAACCTAAACAAAAGACAGCAGAAAGTGTAGGTTGGACACCTTTAAGAATGTTTGGAGGGAGCTCACTTAGTCGATTGTCTGAAGCTCTTGCATCTCCGGGATCTCATGGATATTTAGGCTTGAAAGTCCCTTTTGCTGATATACAAGCAGCAACAAACAATTTTGATAGAAATCTGATCATAGGGTCTGGGGGCTTTGGTATGGTTTACAAAGCGACACTCAAAGAAAATGTGAAGGTTGCGGTCAAGAGAGGAATGCCCGGGTCCAGGCAGGGACTTCCAGAGTTCCAGACTGAAATAGCAATTCTATCCAAAATTCGCCATCGCCATCTCGTTTCACTTGTTGGTTTTTGTGAGGAAAATTCAGAAATGATACTTGTCTATGAGTATGTTGAAAAGGGTCCACTTAAAAAGCATTTGTATGGTTCAGGACTACCTCCTTTGTCTTGGAAGCAGCGTCTCGAGATATGCATTGGTGCAGCTAGAGGTCTTCACTATCTTCACACTGGTTTTGCACAAGGAATCATCCACCGCGACATTAAATCGACCAACATATTGCTTGATGAAAGTTATGTGGCCAAGGTTGCTGATTTTGGTCTTTCAAGATCTGGTCCATGTCTCGATGAAACCCATGTGAGCACTGGTGTGAAAGGCAGTTTTGGTTATCTGGATCCTGAGTATTTCCGGAGGCAGCAACTTACAGATAAATCGGATGTCTATTCGTTCGGGGTTGTTCTTTTCGAGGTTCTTTGTGCCAGACCTGCTGTTGATCCACAACTTACTAGGGAACAGGTGAATTTAGCAGAATGGGCACTTGAATGGCAGAAGAAGGGTATGCTGGAGCATATTGTCGATCCCCATATTGTCGGGCAGATCAAACGCGAATCCTTGAAGAAATTCGGTGAAACAGCTGAGAAATGTTTGGCTGACTATGGTGTTGACCGGCCAACTATGGGTGACGTGTTATGGAATTTGGAATATGTACTTCAGATCCAAGAAAGTGGTCAACTAAGGGAAGCAACAGCCGACTTGACAACTACTGTTGTTACTGGAACTCCTTCTGACAGCATAAGAACACAGGGATATCATGATAATTGTAATTCCGACATAAGTACAAGTGAAGTTTTTTCCCAACTAATCAACAATGAAGGCAGATAG 2490 0.4265 MLQNFPSMAPPQMLVLPLILLVSLIPSSFSFTPVDNYLLNCGSHANASLFNRIFTGDSTKPGSDYLAAGKSITLANQNSPPNSPTLYQTARVFTSTGSYRFHMKSNGIHLVRFHFSPFSAQGFDLKSAKFSVLVGGNTLVKEFQLRNGTLIKEYILKIESNLLEIEFEPVGDSGFGFVNALEVFTAPVDFILDYGARLVDSSGVEEYRNLSSQVLETVYRINVGGSKITPFNDTLWRTWIPDDDYLVFKEAAKRVASTHTPNYQKGGATPEIAPDNVYMTAQEMNRDTSSLASRFNITWKFQVAPAVGGGGVRHLVRLHFCDIVSSALNLLYFDVYINGYSAYKDLDLSSLTVHVLASPIYVDFVVDSDDSGSIEISVGPSDLSSVMRMNALLNGAEIMKMVNVMDSHVVHKRKILWILVGSIVGGVVLLSVVVGLLAFMCRKRKPKQKTAESVGWTPLRMFGGSSLSRLSEALASPGSHGYLGLKVPFADIQAATNNFDRNLIIGSGGFGMVYKATLKENVKVAVKRGMPGSRQGLPEFQTEIAILSKIRHRHLVSLVGFCEENSEMILVYEYVEKGPLKKHLYGSGLPPLSWKQRLEICIGAARGLHYLHTGFAQGIIHRDIKSTNILLDESYVAKVADFGLSRSGPCLDETHVSTGVKGSFGYLDPEYFRRQQLTDKSDVYSFGVVLFEVLCARPAVDPQLTREQVNLAEWALEWQKKGMLEHIVDPHIVGQIKRESLKKFGETAEKCLADYGVDRPTMGDVLWNLEYVLQIQESGQLREATADLTTTVVTGTPSDSIRTQGYHDNCNSDISTSEVFSQLINNEGR 829
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g00050 829 FunFam Putative receptor-like protein kinase 36 187 - -
Accr1g00050 829 Gene3D - 214 403 - -
Accr1g00050 829 Gene3D - 36 189 - -
Accr1g00050 829 PANTHER OS07G0166700 PROTEIN 486 776 IPR045272 GO:0004714|GO:0006468
Accr1g00050 829 CDD STKc_IRAK 505 770 - -
Accr1g00050 829 ProSitePatterns Serine/Threonine protein kinases active-site signature. 619 631 IPR008271 GO:0004672|GO:0006468
Accr1g00050 829 Pfam Malectin-like domain 39 401 IPR024788 -
Accr1g00050 829 ProSiteProfiles Protein kinase domain profile. 499 772 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g00050 829 FunFam receptor-like protein kinase FERONIA 466 574 - -
Accr1g00050 829 Gene3D Transferase(Phosphotransferase) domain 1 575 792 - -
Accr1g00050 829 Gene3D Phosphorylase Kinase; domain 1 472 574 - -
Accr1g00050 829 SUPERFAMILY Protein kinase-like (PK-like) 485 770 IPR011009 -
Accr1g00050 829 ProSitePatterns Protein kinases ATP-binding region signature. 505 527 IPR017441 GO:0005524
Accr1g00050 829 FunFam Receptor-like protein kinase FERONIA 575 788 - -
Accr1g00050 829 SMART serkin_6 499 772 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g00050 829 FunFam Receptor-like protein kinase FERONIA 214 403 - -
Accr1g00050 829 Pfam Protein tyrosine and serine/threonine kinase 504 698 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g00050 Accr-Chr1 1381212 1383701 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g00050 24 829 Receptor kinase-like Gene Family AT5G59700 48.760 0.0 746
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Accr1g00050 Malectin_like 1.8e-33 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g00050 - - gmx:100814974 1217.99