Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g00013 ATGGAACAAAAGAGCATTTTGTTGTCGGCGTTGAGTGTCGGGGTTGGTTTAGGGGTGGGGATCGGGTTGACCCAGGGTCAAACCATGCAGAAATGGGTTGGCGGGAATCGTGAGTCTCAAGAGTTTACCGGGGAACTGATTGAGAAGGAACTCAAGAGGCTCGTGGTTGATGGAAAGAGCATTAATGTCACTTTCGATGATTTTCCTTATCACTTGAGTGAAAGAACTAAAGTGTTGCTGACAAGTGCTGCGTACGTTCATTTAAAACAACATGACTTCTTAAAACATACCCGAAACCTTTCACCTGCAAGCCAATCTATATTACTTTATGGACCTGCAGAATTGTACCAACAGATGCTTGCTAAAGCTTTGGCAAATTGCTTTGAGTCAAAGTTGCTTTTGCTTGATGTTGCTGAATTCTCTAGGATGATGCAGAGTAGATATGGATGTGCAAAAAGGGAATCATCTTTTAAAAGGTCCCTATCCGAGTTGACTTTGGAAAGGATGTCCAGTTTGTTCGGTTCCTTAACAATCCCTTCACCCAGTGATTATAGAGGAACTTCACGTCGACAAATTAAAGGTAACGAAGCTTCTGATAATCCTCCAAAACTTCGAAGGAATGCCTCTTCTGCAGCTGATATGAATAGCATTTCTTCCTATTCTGGATCAACAACTTCAGGTCCCCAGAAGCGCCCAAGTAGTTTATGCTTTGATGAAAAATTGTTTCTGCATTCACTCTATAAGGTCCTGGTTTCTGTATCTGAAATCAGCCCCATAATCCTATATATCAGAGATGCTGGGAATCTTTTTCTCAATTCACACGCGCTATACAGTTTGTTCCAAAGAATGTTAAAGAAGATTTCAGGGTCAGTGTTGATACTTGGTTCCGAGATATTAGATTCAGAAGATGGTGGCAGAGATGTTGATGAGAAGCTCACTGTGTTATTTCCTTACACCATCGAGATTGAATCGCCTGATGACGATGAGGCCAACCCAGGCAGCTGGAAAGCCAAGCTGGAAGAGGACATGAAAGCACTTCAGTTTCAAGATAGCAGAAACCACATTGCTGAAGTACTTGCTGAAAATGACATTGAATGTGATGATTTGAACACTATCTGTCACTCAGACACAATGCTCCTAAGTCAATATATTGAAGAGATTGTGGTATCTTCAATATCTTACCATTTGATGAATCACAAACATCCAGAATATCGAAATGGGAAGTTAATCATATCAGCCAACAGTTTGTCCCATGGATTGAGCCTGTTCCAGGAAGGAAAAACCAGTGGGACTGGTAATCTGAAGTTGGAAAATAATGTCCCTAAGAAGGACAATGGTGGAGAAGGAATTGCTGGTGCAAGGGATGACGAAAATAAAACTGAAACGGAAAAATCCATCCCTGTGACCAAAAAAGATGTCCCTGCGAAAGCAGAAGTTCCTGACAATGAGTTTGAGAAGCGAATAAGGTCTGAGGTTATACCTGCAAATGAGATAGGGGTTACATTTGCAGACATTGGTGCACTTGGTGAAATTAAGGAATCGCTTCATGAGATGGTAATGCTTCCTCTTCGAAGACCAGACCTCTTCAAAGGTGGTCTTCTTAAGCCATGTAGAGGCATATTGCTTTTCGGGCCTCCAGGTACAGGGAAAACCATGATGGCAAAGGCAATTGCGAATGAAGCTGGGGCAAGCTTCATCAATGTCTCAATGTCCACCATTACTTCAAAGTGGTTTGGGGAAGACGAGAAGAATGTCCGAGCTCTGTTCACACTTGCAGCAAAGGTTGCCCCTACAATAATCTTTGTTGATGAAGTTGACAGTATGCTAGGACAGAGAACAAGAAATGGAGAACATGAAGCCATGAGGAAGATAAAAAATGAGTTCATGACCCACTGGGATGGCCTATTGACAAAACCTGGTGAGCAGATTCTTGTACTAGCTGCAACCAACAGGCCATTTGACCTTGATGAAGCAATCATAAGACGGTTTGAGCGTAGAATCATGGTTGGTCTTCCATCTGTTAAGAGCAGGGAACAAATCTTAAAAACCCTCCTATCTAAAGAAAAACATGAAGACATTGACTTCAAAGAACTTGCGGTCATGACAGAAGGATATAGTGGAAGTGATCTCAAGAACTTATGCATGACGGCTGCATATCGACCTCTCAGGGAGCTCATGCAGAAGGAAATTTTGAGGGGAAAGGAAAAGAAGAAAAGAGAGGCAGAAGCCGAAAGCTCAGAAGATGCTACAGATAATAAGGAAAGTGAAAAAGATGAAGAGATTACCCTGAGACCTTTAAACATGGAAGACATGAAATATGCTAAGTCTCAGATTGCTGCAAGTTTTGCTTCTGAAGGATCAGTAATGAGTGAGCTGAAGCAGTGGAATGATTTGTACGGAGAAGGAGGTTCAAGGAAGAAACAGCAGCTTTCGTACTTCCTCTAG 2445 0.4213 MEQKSILLSALSVGVGLGVGIGLTQGQTMQKWVGGNRESQEFTGELIEKELKRLVVDGKSINVTFDDFPYHLSERTKVLLTSAAYVHLKQHDFLKHTRNLSPASQSILLYGPAELYQQMLAKALANCFESKLLLLDVAEFSRMMQSRYGCAKRESSFKRSLSELTLERMSSLFGSLTIPSPSDYRGTSRRQIKGNEASDNPPKLRRNASSAADMNSISSYSGSTTSGPQKRPSSLCFDEKLFLHSLYKVLVSVSEISPIILYIRDAGNLFLNSHALYSLFQRMLKKISGSVLILGSEILDSEDGGRDVDEKLTVLFPYTIEIESPDDDEANPGSWKAKLEEDMKALQFQDSRNHIAEVLAENDIECDDLNTICHSDTMLLSQYIEEIVVSSISYHLMNHKHPEYRNGKLIISANSLSHGLSLFQEGKTSGTGNLKLENNVPKKDNGGEGIAGARDDENKTETEKSIPVTKKDVPAKAEVPDNEFEKRIRSEVIPANEIGVTFADIGALGEIKESLHEMVMLPLRRPDLFKGGLLKPCRGILLFGPPGTGKTMMAKAIANEAGASFINVSMSTITSKWFGEDEKNVRALFTLAAKVAPTIIFVDEVDSMLGQRTRNGEHEAMRKIKNEFMTHWDGLLTKPGEQILVLAATNRPFDLDEAIIRRFERRIMVGLPSVKSREQILKTLLSKEKHEDIDFKELAVMTEGYSGSDLKNLCMTAAYRPLRELMQKEILRGKEKKKREAEAESSEDATDNKESEKDEEITLRPLNMEDMKYAKSQIAASFASEGSVMSELKQWNDLYGEGGSRKKQQLSYFL 814
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g00013 814 MobiDBLite consensus disorder prediction 427 478 - -
Accr1g00013 814 MobiDBLite consensus disorder prediction 180 195 - -
Accr1g00013 814 Gene3D - 672 776 - -
Accr1g00013 814 Pfam ATPase family associated with various cellular activities (AAA) 540 670 IPR003959 GO:0005524|GO:0016887
Accr1g00013 814 MobiDBLite consensus disorder prediction 733 766 - -
Accr1g00013 814 Gene3D - 499 782 IPR027417 -
Accr1g00013 814 SMART AAA_5 536 673 IPR003593 GO:0016887
Accr1g00013 814 Pfam AAA+ lid domain 692 728 IPR041569 -
Accr1g00013 814 MobiDBLite consensus disorder prediction 202 231 - -
Accr1g00013 814 MobiDBLite consensus disorder prediction 180 231 - -
Accr1g00013 814 MobiDBLite consensus disorder prediction 733 768 - -
Accr1g00013 814 ProSitePatterns AAA-protein family signature. 643 662 IPR003960 GO:0005524|GO:0016887
Accr1g00013 814 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 47 813 - -
Accr1g00013 814 FunFam p-loop nucleoside triphosphate hydrolase superfamily protein 499 675 - -
Accr1g00013 814 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 499 733 IPR027417 -
Accr1g00013 814 MobiDBLite consensus disorder prediction 448 478 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g00013 Accr-Chr1 529604 536112 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g00013 500 757 Calmodulin-binding Proteins AT3G56690 39.313 6.52e-45 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g00013 - - gmx:100804099 1152.5