Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr19g00152 ATGGATGACGCTGAAGACTACCACGGCCAATTTTGTCACATGATGATGTCTTTTGATGAGGAAGACGAAGAGTTTCTCAGAAACATTCTTCAGCAGCAGCCTGCAGCTGGTGGAAGTAATATTAGTAATAATAATAAGAATAATAATCACTTGTCTTCTTCTTCTCCTCCTCTAAGCAGAGATAAATCATCCTTTCCCACGGTTGATTTCTCTATCGACAGCTCTGGCGGCAACCGTCATGGTGGTGGTGGTTCGAATGAGGACGACAAAGGCCACGTGTTGTCTGCTAATAAAGCATGCATTTTAGCATTTGATCAATCCAACGCATTACCAGCAGAAGAAGGAGGAATCCCAAAACGTAAAGAATCTAGCACCTCCGAACTTTGTTCAATAAAAAGGAACAGAGATCAGACATGTAATAATATTGTTGAGCCCAGAAAGAAGACTAGAAGCAGTTCGGAGACAGCGAATCACATCATGGCGGAGAGGAGGAGGAGGCAACAACTCTCAGAGAGATTTATTGCACTTTCGGCCACTATTCCGGGCTTGAAGAAGATGGACAAAGCCACGATTCTTCAAGAAGCGACGAGATACGTGAAGCAGCTTCAAGAACGAGTAACAGACTTAGAGAAACAAAATAGCATAATAATAAACACTTCATCATCATCATCATCATCATCAGATCAGAAATCATCGATGATGAGATCGATAAAGAAATATTGCGAGCTACATAGAGTTGATATTAATGATGATGATGATAAGAGTTGTGAAGCCAAAAATGAAATGTTGCCTCAGATTGACGCAAAAGTGTTGGAGAATCAAGTGCTGTTTGGGATCTATTGTGAGAAGCGAAGGGGCATTGAGTTTAAAATATCGAATTTGCTTGAGTGTTTTCATCTTTATGTCACTAGTAGCAGCGTCTTGCCATTTGGGAATTCCACTCTTGGTATCACCATCATTGCCCAGATAGGGCAGGACTACAGAATGACAGTGAATGAAGTGATGAAAAACCTACACCAAATGCTATCGAAGTCGCAGGACGCAGGTGATCCGTACTAG 1059 0.4164 MDDAEDYHGQFCHMMMSFDEEDEEFLRNILQQQPAAGGSNISNNNKNNNHLSSSSPPLSRDKSSFPTVDFSIDSSGGNRHGGGGSNEDDKGHVLSANKACILAFDQSNALPAEEGGIPKRKESSTSELCSIKRNRDQTCNNIVEPRKKTRSSSETANHIMAERRRRQQLSERFIALSATIPGLKKMDKATILQEATRYVKQLQERVTDLEKQNSIIINTSSSSSSSSDQKSSMMRSIKKYCELHRVDINDDDDKSCEAKNEMLPQIDAKVLENQVLFGIYCEKRRGIEFKISNLLECFHLYVTSSSVLPFGNSTLGITIIAQIGQDYRMTVNEVMKNLHQMLSKSQDAGDPY 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr19g00152 352 SMART finulus 159 208 IPR011598 GO:0046983
Accr19g00152 352 MobiDBLite consensus disorder prediction 35 81 - -
Accr19g00152 352 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 155 217 IPR036638 GO:0046983
Accr19g00152 352 PANTHER BHLH TRANSCRIPTION FACTOR 24 344 - -
Accr19g00152 352 Coils Coil 192 219 - -
Accr19g00152 352 Pfam Helix-loop-helix DNA-binding domain 156 203 IPR011598 GO:0046983
Accr19g00152 352 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 153 202 IPR011598 GO:0046983
Accr19g00152 352 MobiDBLite consensus disorder prediction 35 91 - -
Accr19g00152 352 Gene3D - 150 225 IPR036638 GO:0046983
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr19g00152 149 343 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 41.117 1.11e-35 130
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Accr19g00152 HLH 3.3e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr19g00152 - - pcin:129287632 381.719