Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr19g00150 ATGGATGATGCTGAAGACTTCCAAGGCCAATTTTGTCACATGATGGTGTCTTTTGATGAGGAAGACGAAGAGTTTCTCAGAAACATTCTTCAGCAGCAGCCTGCAGCTGGTGGAAATAATATTAGTAATAATAATAAGAATAATAATCACTTGTCTTCTTCTTCTTCTCAAATCAGAGATAAATCATCCTTTCCCACGGTCGATTTCTCTATCGACAGCTCTGGCGGCAACCGTCATGGTGGTGGTGGTTCGAATGAGGACAACAAAAGCCACGTGTTGTCAACTAATAAAGCATGCATTTTAGCATTTGATCAATCCAACATATTGCCAGCAGAAGAAGAAGGAATCCCAAAACACGAAGAATCTAGCACCTCCGAACTTTGTTCATTAAAAAGGAACAGAGATCAGACATGTAATAATGTGGTTGAGCCCAGAAAGAAGGCTAGAAGCAGTTCGGAGACAGTGAATCACATCATGGCCGAGAGGAGGAGGAGGCAACAACTCACTGAGAGATTTATTGCACTTTCTGCAACTATTCCGGGCTTGAAGAAGATGGACAAAGCCACGATTCTTCAAGAAGCGACGAAATACGTGAAGCAGCTTCAAGAACGAGTAACAGAGCTAGAGAAACAAAATAGCATAATAATAAACACTTCATCATCATCTTCAGATCAGAAATTATCCATGAGATCGGTAAAGAAATATCGTGATCTGCACAGAGTTAATATTAATGATGATGATGATGATGATAAGTGCTGTGAAGCCAAAAATGACGTGTTGCCTCAGATTGAGGCAAAAGTGTTGGAGAATCAAGTGCTGTTTGGGATCTATTGTGAGAAGCAAAAGGGCATTGAGTTTAAAATATTGAATTTGCTTGAGAGTTTTCATCTTTATGTCACTAGTAGCAGCGTCTTGCCATTTGGGAATCGCACTCTTGGTATCACCATCATTGCCCAGATGGGAGAGGAATACAGAATAACAGTGAATGAAGTGATGAAAAACCTAAAACAAGTGCTATCCAAGTCGCAGGAAGAAGTTGATCCGTACTAG 1050 0.4048 MDDAEDFQGQFCHMMVSFDEEDEEFLRNILQQQPAAGGNNISNNNKNNNHLSSSSSQIRDKSSFPTVDFSIDSSGGNRHGGGGSNEDNKSHVLSTNKACILAFDQSNILPAEEEGIPKHEESSTSELCSLKRNRDQTCNNVVEPRKKARSSSETVNHIMAERRRRQQLTERFIALSATIPGLKKMDKATILQEATKYVKQLQERVTELEKQNSIIINTSSSSSDQKLSMRSVKKYRDLHRVNINDDDDDDKCCEAKNDVLPQIEAKVLENQVLFGIYCEKQKGIEFKILNLLESFHLYVTSSSVLPFGNRTLGITIIAQMGEEYRITVNEVMKNLKQVLSKSQEEVDPY 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr19g00150 349 Coils Coil 191 218 - -
Accr19g00150 349 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 154 216 IPR036638 GO:0046983
Accr19g00150 349 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 152 201 IPR011598 GO:0046983
Accr19g00150 349 SMART finulus 158 207 IPR011598 GO:0046983
Accr19g00150 349 PANTHER BHLH TRANSCRIPTION FACTOR 26 341 - -
Accr19g00150 349 Pfam Helix-loop-helix DNA-binding domain 155 202 IPR011598 GO:0046983
Accr19g00150 349 MobiDBLite consensus disorder prediction 35 90 - -
Accr19g00150 349 Gene3D - 143 216 IPR036638 GO:0046983
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr19g00150 148 340 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 43.590 1.28e-39 141
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Accr19g00150 HLH 3.6e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr19g00150 - - pcin:129287632 403.675