Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr19g00123 ATGACCGGCGATACTTCGTACTCTGCAGACAACAAGAGCTTGTCGCCGAGTCAAAACCTCGACATCACGATAGAGGAAGGATCTCCAAACAGTGAGCAATTACTCGATGTTGAGGATGAGTGCAATGACTTTGAAAATGACTGTGGGCAGCTGTTTGAGATTGATGGAGTCGATCATGAAAATGGGAGAGATGAAACGGATCTTGTTGATTTTCATGATGGGGAATCTCAAGTTAAGGACTACCCTCCACCAGTAGTAGGGATGGAATTTGATACATATGATGATGCCTATAATTACTACAATAGCTATGCCAAGGAACTTGGATTTGCTATTAGGGTTAAATCATCATGGACCAAACGTAACAGCAAAGAGAAACGTGGTGCTGTGCTCTGCTGCAACTGTGAGGGTTTCAAGACAGTCAAGGAAGCAAATAGTCGTAGGAAAGAAACAAGAACAGGTTGTCTGGCTATGATTAGGTTGAGATTAGTGGAATCTAACAGGTGGAGAGTGGATGAAGTCAAGCTTGAGCATAACCATTCATTTGATCCTGAGAGAGCACAAAACTCTAAATCACACAAGAGGATGGAAAGTGGTGCCAAGAGAAAGATTGAGCCAACTTTAGACGTTGAAGTAAGAACAATCAAGTTATACAGAACGCCTATAATGGATTCATCAGGCTGTAGAAGCTCAAATGCTAATGAAGATGGAACTAATGACCACACTAGTTTTTCCAGGCATTTAAAACTTAGGGAAGGGGATGCACAAGTTATTGCAAACTACTTCTGCCACAAACAAATGATGAATCCTAACTTTTTCTATGTGATGGACCTGGCTGATGATGGGCGAATGAGGAACGTCTTTTGGATTGATTCAAGATCGAGGGCTGCATATGGTTACTTTGGTGATGTGGTTGCAATTGACTCAACATGCTTGTCAAACAATTATGAGATTCCACTGGTTGCATTTGTTGGTGTTAATCACCATGGGCACTCTATTTTATTTGGATGTGGTCTGCTTGCTGATGAGTCATTTGAAACATACATATGGCTATTTAGGGCATGGCTTACATGTATGTCTGGTCGCCCTCCACAAACTATCATTACAAATCAGTGTAAAACCATGCAAAGTGCAATAAATGAGGTTTTCCCAAGAGCCCACCATAGAATTTGTCTTTCACAAGTCATGCAGAGCATCCTTGGAGACTTTGCACTGTCACAAGAATATGATGCATTTCAGATGGCGTTGACGAAAGTGATATATGAATCTAAAACAGTTGATGAATTTGAGAGGGCTTGGGAGGGTTGGACTCAACATTTTGGAATAAGCAATCATGAGAAGCTCCAGACCCTACATGAAGAACGGGAGCGTTGGGCCCCAGTTTATTCCAAGGACACATTTTTTGCTGGAATTTCTGATTACGTAAAGGATGAGGCCACAAGTCCCTTTTTCTATGGTCATGTGCATCAACAAACTTCTTTGAAAGAATTTTTTGACATTTTGGAATCAGTTTCACAAGAGAAGCATAGAAGAGAAGCTCTTGCTGATTTAGAGTCGAGAGATTCAACACCCTTACTGAAAACAAGATCTTACTATGAGTTGCAGCTCTCAAAACTTTACACAGATGCAGTATTTAGCAAGTTCCAGGATGAAGTGTTGATAATGTCTTCCTGTCTCAGCATCACAGAATTGCAAACAAATGGGTCGATGGTGACGTACATAGTTAAAGAACATGTAGGGGAGGAATCAGTGAGTGATGTCAGGCAATTTGAAGTCATGTACGATAAAGCCGGAGTAGAAGTTCGCTGCGGATGTAACTGCTTTAACTTCAAAGGCTATCTATGCGGGCATGCCTTGTGTATTCTTAATTACAATGGCGTGCAGGAAATTCCATGTCAGTATATTTTGTCAAGATGGAGGAAGGATTATAAGAGATTGTATGTACCAAATCTAAGCTCCAATAATGTTGATATCACCAACCCTGTTCAGTGTTATGATCATTTGTACAGACGGGCTATGCAAGTTGTTGAAGAAGGAATGGTATCACAAGATCATTATATGGTTGCTTGGCAGGCATTTAAAGAGTCATTGAACAAGGTTCGCCTAGTAGCAGCTGATAAGATTGATTAA 2127 0.4081 MTGDTSYSADNKSLSPSQNLDITIEEGSPNSEQLLDVEDECNDFENDCGQLFEIDGVDHENGRDETDLVDFHDGESQVKDYPPPVVGMEFDTYDDAYNYYNSYAKELGFAIRVKSSWTKRNSKEKRGAVLCCNCEGFKTVKEANSRRKETRTGCLAMIRLRLVESNRWRVDEVKLEHNHSFDPERAQNSKSHKRMESGAKRKIEPTLDVEVRTIKLYRTPIMDSSGCRSSNANEDGTNDHTSFSRHLKLREGDAQVIANYFCHKQMMNPNFFYVMDLADDGRMRNVFWIDSRSRAAYGYFGDVVAIDSTCLSNNYEIPLVAFVGVNHHGHSILFGCGLLADESFETYIWLFRAWLTCMSGRPPQTIITNQCKTMQSAINEVFPRAHHRICLSQVMQSILGDFALSQEYDAFQMALTKVIYESKTVDEFERAWEGWTQHFGISNHEKLQTLHEERERWAPVYSKDTFFAGISDYVKDEATSPFFYGHVHQQTSLKEFFDILESVSQEKHRREALADLESRDSTPLLKTRSYYELQLSKLYTDAVFSKFQDEVLIMSSCLSITELQTNGSMVTYIVKEHVGEESVSDVRQFEVMYDKAGVEVRCGCNCFNFKGYLCGHALCILNYNGVQEIPCQYILSRWRKDYKRLYVPNLSSNNVDITNPVQCYDHLYRRAMQVVEEGMVSQDHYMVAWQAFKESLNKVRLVAADKID 708
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr19g00123 708 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 76 700 IPR031052 GO:0006355
Accr19g00123 708 Pfam MULE transposase domain 303 396 IPR018289 -
Accr19g00123 708 ProSiteProfiles Zinc finger SWIM-type profile. 589 625 IPR007527 GO:0008270
Accr19g00123 708 SMART 26again6 600 627 IPR006564 GO:0008270
Accr19g00123 708 Pfam FAR1 DNA-binding domain 98 182 IPR004330 -
Accr19g00123 708 MobiDBLite consensus disorder prediction 179 200 - -
Accr19g00123 708 MobiDBLite consensus disorder prediction 1 25 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Accr19g00123 MULE 1.8e-27 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr19g00123 K17604 - gmx:100796448 1156.35