Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr19g00122 ATGGCAGAAGTTTCTCTCAACAGTGAGCCAGTAATAGATGATGATGCTGATGGATTTGAGATTGAAGGGGATTGTGAAATGGCGGATTTTGTCAGTCAAACTGGCATAATACAAGGGGAGAACCCACTTCCCCCCGCTGTTGGAATGGAATTTGAGACTTATGAGGATGTATATTATTTCTATAATTGCTACGCCAGGGATCAAGGATTTGGGGTTCGAGTAAGTAATACTTGGTATAGGAGGAGCAAGGAACGTTACAGAGGAAAATTCAGCTGCAGTAGTGCTGGGTTCAAGAAAAGAAGTGAAGCGAATCGCCCAAGACCTGAAACAAGAACTGGTTGTCCAGCAATGATAAAGTTCAGGCTGACAGATTCCAAAAGGTGGAGAATTATAGAAGTGGAGCTTGAGCATAATCACTTGATAAGCCCAACAAGTGGAAAGTTCTACAAATCTCATAAGCGCCTGGGTTTGGGGACCAAAAGAGCATTGCAATTAGACAGTACTGAAGAAGTTCAGAAAATTAGACTATTTCGAACTGTGATTGTTGATGGTGAGACTAATGGAAGTGTAGAAGTTGATGAAGGACAACCCAAAAGCAAAGCCATATGGTCCGATCAATTGAAGCTAAATAAAGGTGATGCAGAGGCAATACTAAATTTTTTGAGTCACTCGCAGCTAACAGATCCACACTTCTTCTATGTGATGGATATCAGTGAGAAGGGATGCTTGAGGAATTTGTTTTGGGCCAATGAAAGGTCCAGAGTAGCATACGATTATTTCGGTGATGTACTTGCAATTGATACTACATGTTTGACAGGTGAGTATGAAGTTCCTCTGGTTCTATTTCTCGGAGTGAATCACCATAAGCAATCAATTCTGTTTGGTTGTGGATTGATCGCTGGCGAAACCATTGAATCATATACATGGCTACTCAGGGGGTGGATTACATGTATCCTAGGACGCCCTCCACAAGTCATTATTACTGACCAATGTAGTGTCTTGCAAACAGTGGTTGCCGATGTTTTTCCGAGAGCTTCCCACTGTCTTTGCTTATCCAATATCATGCAAAAAATTCCAGAAAAACTTGGGGGGTTGCTAGAATATGAGGCAGTGAAAGCAGCAATTACTAGAGCAGTTTATTACTCTCTGAGGACTGAGGAATTCGATGTGGCTTGGGAGGACATGGTTCAGCAATATGAAATTAGAGGCCATGAGTGGCTTCAAGCATTATACGGCGATAGGAAACGGTGGGTCCCAGTTTATGTGAAGGAAACCTTCTTGGCAGGAATGTTTCCGACACAACCAAGTGACAAGGTGCTATGGTTTTTTGAGGGCTACTTAAGTAATCAAACTCCTCTGAAGGAATTTCTTGAAAAATATGACCAAGCCTTGCAGACAAAGTGGCAGCATGAAGCACTCGCAGATCTGGACTCGAGAAATTCAACCTTTATGCATAAGCCAAGTTGTTACTTTGAGTTGCAGGTCTCAAAATTGTACACAAATGAACTATTCAGAATGTTTGAAAGGGAAATAAAAGGAATGTACTCCTGTTTAAGCAGCAGACAGATAAATGTGGATGGGCCAGTGATCTCATACCTCATCAAGGAACAAGTTGAAGTTGAAGTTGAAGGAAATCATCAGAGAGTTACAAGAGATTATGAGGTGTATTACAATGGGTCCGAAATGGAGGTTCATTGCATTTGTGGTTTGTTCAACTTCAAAGGAATATTGTGTAGGCATGCACTATCTGTTTTAAACCAGAATGGTATAGAAGAGATTCCACCTCAGTACATTCTCTCAAGATGGAGAAAAGATGTGAAGCGAAGTTATGTTATTGATCACAAATCTAGTGGCATTGATATTGACAACCCAGTTCATAGGTATGACCATTTATATAGACGCATAGTTCAGGTTGTGGAGGAAGGTGGGAAATCGCATGGCCGTTTCAGGACTGCTATGCAAGAATTCAGTCAGATATTGGACAAACTTAAACGTGTAAATTTAGAGGACAATGCAATATAG 2022 0.411 MAEVSLNSEPVIDDDADGFEIEGDCEMADFVSQTGIIQGENPLPPAVGMEFETYEDVYYFYNCYARDQGFGVRVSNTWYRRSKERYRGKFSCSSAGFKKRSEANRPRPETRTGCPAMIKFRLTDSKRWRIIEVELEHNHLISPTSGKFYKSHKRLGLGTKRALQLDSTEEVQKIRLFRTVIVDGETNGSVEVDEGQPKSKAIWSDQLKLNKGDAEAILNFLSHSQLTDPHFFYVMDISEKGCLRNLFWANERSRVAYDYFGDVLAIDTTCLTGEYEVPLVLFLGVNHHKQSILFGCGLIAGETIESYTWLLRGWITCILGRPPQVIITDQCSVLQTVVADVFPRASHCLCLSNIMQKIPEKLGGLLEYEAVKAAITRAVYYSLRTEEFDVAWEDMVQQYEIRGHEWLQALYGDRKRWVPVYVKETFLAGMFPTQPSDKVLWFFEGYLSNQTPLKEFLEKYDQALQTKWQHEALADLDSRNSTFMHKPSCYFELQVSKLYTNELFRMFEREIKGMYSCLSSRQINVDGPVISYLIKEQVEVEVEGNHQRVTRDYEVYYNGSEMEVHCICGLFNFKGILCRHALSVLNQNGIEEIPPQYILSRWRKDVKRSYVIDHKSSGIDIDNPVHRYDHLYRRIVQVVEEGGKSHGRFRTAMQEFSQILDKLKRVNLEDNAI 673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr19g00122 673 Pfam MULE transposase domain 263 357 IPR018289 -
Accr19g00122 673 Pfam FAR1 DNA-binding domain 60 141 IPR004330 -
Accr19g00122 673 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 39 664 IPR031052 GO:0006355
Accr19g00122 673 ProSiteProfiles Zinc finger SWIM-type profile. 553 589 IPR007527 GO:0008270
Accr19g00122 673 SMART 26again6 564 591 IPR006564 GO:0008270
Accr19g00122 673 Pfam SWIM zinc finger 553 586 IPR007527 GO:0008270
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Accr19g00122 MULE 3.3e-24 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr19g00122 - K17604 pcin:129287794 1226.85