Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr19g00112 ATGGCCATTGCATCTTTCACTTTGTCGTCTCTGCTTCAGCCCTCAACCTCTTTTATTTCATCTTCTTCATCTTCTTACTTCCTTGGTGGGGTCCACCTCCGTTCCCATGAAAGCTTCATCTCCATCCGTTCGCTTTATTCGACGTCAAATACGGAGGTCCCTTCTAGACGCCTGCGAATAGTGGCTGTTGCTTCCGGCGGCTACTATGCTGCTCTTGGAGTCCCCAAATCCGCCACAAGCAAGGAAATTAAAGCGGCTTATCGAAGGTTAGCTCGCCAGTACCACCCTGATGTTAACAAGGAGCCTGGAGCAACTGAAAAGTTCAAAGAGATTAGTGCTGCATATGAGGTACTATCAGATGATAAAAAGAGGGCTTTATATGATCAATATGGAGAGGCTGGAGTTAACGGCTCAATGGGAGGAGCATCTAGTGCTTATGCGACTAATCCATTTGATTTATTTGAGACAATTTTTGGACCAAATATGGGTGGCTTCCCTGGCATGGATCCAGCTGGATTTGGAGCACGTCGTCGCAATAATACTGTTACTAAGGGAGAAGATATCCGTTATGACATGACCTTGGAATTTTCTGAGGTAATTTCTGGAGCAGAGAAAGAATTTGATCTTTCTCATTTGGAAACGTGTGAAGTTTGTATTGGTACTGGGGCAAAGGTGGGCTCCAAGATGAGAGTTTGCGCAACTTGTGGTGGTAGGGGTCAGGTGATGAGGACTGAACAAACACCTTTTGGAATGTTCTCTCAGGTTTCAATATGTCCAAACTGTGGAGGGGAAGGCGAAGTCATATCTGAATATTGTTATAAATGCAGCGGAAAAGGAAGTCTACGAGTTAAGAAGAAAGTTAAAGTTAAAGTTCCACCTGGGGTTAGCTCTGGCAGTATATTGAGAGTTGTTGGGGAAGGTGATGCTGGACCAAGAGGGGGTCCTCCAGGAGATGTTTATGTTTATCTTGATGTGAAAGAAATACCGGGAATTGAAAGAGATGGTATTAATCTCTGTTCAACAATCACAATCGGCTACCTAGATGCCATACTTGGAGCCATTGCCAAAGTAAAGACAGTTGAAGGCATTTCTGAAGTACAAATACCTCCTGGTACCCAACCAGGATATATGCTTATCCTTGCAAGAAAAGGCGTTCCAAAATTAAACAAACCTTCAATACGCGGGGATCATTTGTTTACAGTTAAAGTCACTATACCAAAACGTATCAGTACAAAGGAACGTGGGCTGCTTGAAGAACTTGCTTTGCTAGGCAACAACACTACAAGCAACAGATCAAAATCCCGTTCTAGAACTCAATCTTCTGCAGGAAGCACAGAAGGTCCATCATCTCAAGATGCTGAAAGTCCGGCAGCAACATTTGCAGAAAAAGCTGAGGAATCAGAAGATCAAAATGACATATGGAAAAAGTTAAAGGATCTTGCTAGACCTCTCGCAAATGGAGCATTGAAGTGGCTAAAAGATAATCTCTAG 1491 0.4339 MAIASFTLSSLLQPSTSFISSSSSSYFLGGVHLRSHESFISIRSLYSTSNTEVPSRRLRIVAVASGGYYAALGVPKSATSKEIKAAYRRLARQYHPDVNKEPGATEKFKEISAAYEVLSDDKKRALYDQYGEAGVNGSMGGASSAYATNPFDLFETIFGPNMGGFPGMDPAGFGARRRNNTVTKGEDIRYDMTLEFSEVISGAEKEFDLSHLETCEVCIGTGAKVGSKMRVCATCGGRGQVMRTEQTPFGMFSQVSICPNCGGEGEVISEYCYKCSGKGSLRVKKKVKVKVPPGVSSGSILRVVGEGDAGPRGGPPGDVYVYLDVKEIPGIERDGINLCSTITIGYLDAILGAIAKVKTVEGISEVQIPPGTQPGYMLILARKGVPKLNKPSIRGDHLFTVKVTIPKRISTKERGLLEELALLGNNTTSNRSKSRSRTQSSAGSTEGPSSQDAESPAATFAEKAEESEDQNDIWKKLKDLARPLANGALKWLKDNL 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr19g00112 496 SUPERFAMILY HSP40/DnaJ peptide-binding domain 183 326 IPR008971 GO:0006457|GO:0051082
Accr19g00112 496 SMART dnaj_3 68 123 IPR001623 -
Accr19g00112 496 ProSitePatterns Nt-dnaJ domain signature. 108 127 IPR018253 -
Accr19g00112 496 PRINTS DnaJ domain signature 103 123 IPR001623 -
Accr19g00112 496 PRINTS DnaJ domain signature 123 142 IPR001623 -
Accr19g00112 496 PRINTS DnaJ domain signature 87 102 IPR001623 -
Accr19g00112 496 PRINTS DnaJ domain signature 69 87 IPR001623 -
Accr19g00112 496 Pfam DnaJ C terminal domain 188 406 IPR002939 -
Accr19g00112 496 NCBIfam molecular chaperone DnaJ 68 421 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Accr19g00112 496 FunFam Chaperone protein dnaJ 1, mitochondrial 326 434 - -
Accr19g00112 496 Pfam DnaJ domain 68 128 IPR001623 -
Accr19g00112 496 Hamap Chaperone protein DnaJ [dnaJ]. 64 480 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Accr19g00112 496 SUPERFAMILY DnaJ/Hsp40 cysteine-rich domain 202 281 IPR036410 -
Accr19g00112 496 MobiDBLite consensus disorder prediction 427 456 - -
Accr19g00112 496 SUPERFAMILY Chaperone J-domain 66 171 IPR036869 -
Accr19g00112 496 CDD DnaJ 68 120 IPR001623 -
Accr19g00112 496 Gene3D - 331 422 - -
Accr19g00112 496 MobiDBLite consensus disorder prediction 427 471 - -
Accr19g00112 496 FunFam Chaperone protein dnaJ A6 chloroplastic 215 279 - -
Accr19g00112 496 ProSiteProfiles dnaJ domain profile. 67 131 IPR001623 -
Accr19g00112 496 Gene3D - 185 321 - -
Accr19g00112 496 SUPERFAMILY HSP40/DnaJ peptide-binding domain 332 417 IPR008971 GO:0006457|GO:0051082
Accr19g00112 496 Gene3D - 215 279 - -
Accr19g00112 496 ProSiteProfiles Zinc finger CR-type profile. 202 284 IPR001305 GO:0031072|GO:0051082
Accr19g00112 496 Pfam DnaJ central domain 215 279 IPR001305 GO:0031072|GO:0051082
Accr19g00112 496 Gene3D DnaJ domain 66 167 IPR036869 -
Accr19g00112 496 FunFam Chaperone protein dnaJ A6 chloroplastic 64 170 - -
Accr19g00112 496 CDD DnaJ_C 186 409 - -
Accr19g00112 496 PANTHER DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED 29 432 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr19g00112 68 130 C2H2 Transcription Factor Family AT1G74250 46.377 1.71e-10 61.6