Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr19g00110 ATGGGTAAAGCTTTTTGCCCTATATTTTTCTGTGCAAAGGGTTCAGATCGAAAAAAACGAAGTAAGAAAGTGTCTACATGGAGAGTCTTTTCTTTGAAGGAACTACACTCAGCGACAAATAATTTTAACTATGATAACAAGCTTGGAGAAGGGGGATTTGGCAGTGTATACTGGGGCCATCTTTGGGATGGATCACAAATTGCAGTAAAAAGATTAAAAGTTTGGAGCAACAAAGCAGATATGGAATTTGCTACTGAAGTTGAGATATTAGCCAGAATAAGACACAAGAATCTTCTTAATCTTCGTGGCTATTGTGCTGAAGGGAAGGAAAGAATAATTGTATATGATTATATGCCGAATTTGAGCCTCCTCTCTCATCTTCATAGACAGCACTCTGCAGATTGCCTTCTTCATTGGAACAGGCGCATGAATATCGCAATTGGGGCAGCCGAGGGAATTTTATATCTTCATCACCATGCAACACCCCACATAATCCACAGGGATATCAAATCAAGCAATGTGTTACTAGATGCAGATTTCCAGGCTCAGGTTGCTGATTTTGGTTTCGCTAAGTTGATCCCTGATGGTGCAACCCATGTGACTACAAGAGTTAAGGGAACCCTCGGCTACCTCGCACCGGAATATGCCATGCTTGGCAAGGCATCTGAGAGTTGCGATGTTTATAGTTTTGGGATTCTACTGCTAGAACTCGCAAGTGGAAAGAGACCAATTGAGAAATTAAGTGCTTCGATGAAGCGATCAATAGCTGACTGGGCACTACCACTGGTTATTGGGAAGAGATTGAGTGAACTTGCAGATCCGAAGCTAAAGGGTAAGTATGTGGAGGAAGAACTCAAAAGAATGATTCTTGTTGCACTCGTATGTGCTCAAAATCAGCCTGAAAAAAGACCCAGCATGCTTGAGGTGGTAGAACTGCTCAAGGGAGATTCTAAGGATATGTTATGTGAGTTAGAAAAGAATGAAATTTTCAGACACCTTCCAGCTTCTGAAAACAGCGATGGGGAATTAGCTGCTGAAGATAGTTCAGACTTCATGTGA 1059 0.4164 MGKAFCPIFFCAKGSDRKKRSKKVSTWRVFSLKELHSATNNFNYDNKLGEGGFGSVYWGHLWDGSQIAVKRLKVWSNKADMEFATEVEILARIRHKNLLNLRGYCAEGKERIIVYDYMPNLSLLSHLHRQHSADCLLHWNRRMNIAIGAAEGILYLHHHATPHIIHRDIKSSNVLLDADFQAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYAMLGKASESCDVYSFGILLLELASGKRPIEKLSASMKRSIADWALPLVIGKRLSELADPKLKGKYVEEELKRMILVALVCAQNQPEKRPSMLEVVELLKGDSKDMLCELEKNEIFRHLPASENSDGELAAEDSSDFM 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr19g00110 352 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 7 330 - -
Accr19g00110 352 Gene3D Transferase(Phosphotransferase) domain 1 118 330 - -
Accr19g00110 352 SMART serkin_6 42 313 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr19g00110 352 CDD STKc_IRAK 48 315 - -
Accr19g00110 352 Gene3D Phosphorylase Kinase; domain 1 12 117 - -
Accr19g00110 352 Pfam Protein kinase domain 43 310 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr19g00110 352 FunFam PTI1-like tyrosine-protein kinase At3g15890 118 329 - -
Accr19g00110 352 ProSitePatterns Serine/Threonine protein kinases active-site signature. 164 176 IPR008271 GO:0004672|GO:0006468
Accr19g00110 352 FunFam PTI1-like tyrosine-protein kinase At3g15890 14 117 - -
Accr19g00110 352 ProSitePatterns Protein kinases ATP-binding region signature. 48 70 IPR017441 GO:0005524
Accr19g00110 352 PIRSF ILK 9 330 - -
Accr19g00110 352 ProSiteProfiles Protein kinase domain profile. 42 321 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr19g00110 352 SUPERFAMILY Protein kinase-like (PK-like) 22 313 IPR011009 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr19g00110 30 320 Trihelix Transcription Factor Family AT1G70460 48.822 9.19e-92 287
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XV Accr19g00110 Pkinase 5.8e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr19g00110 - - cave:132188407 587.03