Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr19g00109 ATGACTTTTTGCCCTATATCTTTCTGTGCAAAGCTTCTGGATCGAAAAGCACGAGGCAAGAAAGCACCTACATGGAGGGTCTTCTCTTTGAAAGAATTACGTACAGCAACAAATAATTTTAACTATGATAACAAGCTTGAAGAAGCAGAATTTTGCAGTGTCTACTGGGGCCAGCTTTGGAATGGATCACAAATTGCAGTCAAGAGATTGAAAATTTGGAGCGACAAGGCTTACACAGAATTTGCCGTTGAAGTTGAAATATTGGCAAGAGTACAACACAAGAATCTTGTTAGCCTAAGTGGATATTGTGCTGAGGAGCAAGAAAGGCTAATTGTATATGACTATATGCCAAATTTGAGCCTCTTCTCTCAGCTTCATGAACAGCATCCTGAAGAATGCCTTCTTGATTGGAATAAACGGATGAACATCGCAATCGGGTCATCTGAGGGCATCGCATATCTTCACCACCAAGTAACACCACAAATAATCCATAGAGATATCAAAGCAAGCAATGTACAAATTGATTTAGATTTCCAAGCTCAGATTTCTGGTTTTGAATTTGCGAAGTTGATTTCTGATTCGACAACCCATAGTAGAAGTAATGTCAAGGGAACTCTCGGTTACATTGCACCAGAATATGCCTTGCTCGGTAAGGCATCCGCAAGTTGTGACGTTTACAGCTTTGGAATTCTGTTGCTGGAACTTGCTAGTGGTAAGAGACCAATTTTAAAACCAAATGCCATGACGAAGCAATTGATATATGATTGGGCACTTTCTTTGACCTGGGAAAAGAAATTTAGTGAAATTGCAGATTCAAAGCTTAAAGGAAATTTTGTAGGGGAAGAACTTAAAAGAGTGATTCTCATTGGACTTATATGTGCTCAGAGTCAGCCAGAGAAGAGACCAACCATGCTTGAGGTGGTAGAGATGCTTAAAGGAGAATCTAAGGATAAGTTATCTCAATTAGAAAAGAATGAATTGTTCACAAACCCTTCAACATTGGAAAACAAAAATGGGCTTCTAGTCTCATAA 1032 0.3905 MTFCPISFCAKLLDRKARGKKAPTWRVFSLKELRTATNNFNYDNKLEEAEFCSVYWGQLWNGSQIAVKRLKIWSDKAYTEFAVEVEILARVQHKNLVSLSGYCAEEQERLIVYDYMPNLSLFSQLHEQHPEECLLDWNKRMNIAIGSSEGIAYLHHQVTPQIIHRDIKASNVQIDLDFQAQISGFEFAKLISDSTTHSRSNVKGTLGYIAPEYALLGKASASCDVYSFGILLLELASGKRPILKPNAMTKQLIYDWALSLTWEKKFSEIADSKLKGNFVGEELKRVILIGLICAQSQPEKRPTMLEVVEMLKGESKDKLSQLEKNELFTNPSTLENKNGLLVS 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr19g00109 343 FunFam PTI1-like tyrosine-protein kinase At3g15890 116 327 - -
Accr19g00109 343 CDD STKc_IRAK 51 313 - -
Accr19g00109 343 SMART serkin_6 40 311 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr19g00109 343 Gene3D Transferase(Phosphotransferase) domain 1 116 329 - -
Accr19g00109 343 Pfam Protein tyrosine and serine/threonine kinase 42 311 IPR001245 GO:0004672|GO:0006468
Accr19g00109 343 ProSiteProfiles Protein kinase domain profile. 40 328 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr19g00109 343 FunFam PTI1-like tyrosine-protein kinase At3g15890 12 115 - -
Accr19g00109 343 SUPERFAMILY Protein kinase-like (PK-like) 23 311 IPR011009 -
Accr19g00109 343 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 26 334 - -
Accr19g00109 343 Coils Coil 305 325 - -
Accr19g00109 343 Gene3D Phosphorylase Kinase; domain 1 11 115 - -
Accr19g00109 343 PIRSF ILK 9 326 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr19g00109 28 313 Receptor kinase-like Gene Family AT5G45780 42.759 7.45e-80 252
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XV Accr19g00109 PK_Tyr_Ser-Thr 5.4e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr19g00109 - - pcin:129288687 513.072