Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr19g00104 ATGAGCTTATACAGAAGTGGAACCTTGTTTATCTTTGTGTTTTTTCTGCTAAGACTGTGTTTGGCCGACCATCAACACATAAGCCATATTGATCCCAGATTTGAGGCATCTCAGCTGGACTGGAATGACCATGGTGGATTGTTCTTACTATCCAACAACTCAGTTTTCGGTTTTGGATTCTTCGGTACTCTTGATGTTTCTTTGTTTGTTTTAGTTGTCCTTCACTTGAAAAGCTATAAAGTGGTTTGGACTGCAAACAGAGGCTTACTGGTAAGAAACTCTGATAAATTTGTGTTTGACAATACTGGAAATGCTTATTTGGAAAGACAAGGTGTTGTGGTTTGGGCAACAAACACAGGAGGACGTAAAGTTAGAGCCTTGGAACTTGAAGATTCAGGGAATTTAGTGATTATTGATGAAGCACGAAGAGTTATTTGGGAGAGTTTTAGCCATCCTACTGATACCCTTTTGCCTAATCAACTTTTTGTTGAAGGAATGGGTCTCAAAAGCTTCCCTAACCGCAATAACTTGTTGAGTTATCTTACTTTTATGTCTGGTGATTTGGTTTTGTATGCTGGTTATGATCCTCCTCAGATATATTGGTCCTTATCAAGTGAAAGCAATAATGTTAGTAAGGGGGTTCATTTTCATTCTGCTCGTCTGGTTTCAAATTCTTGGAATTTCTATGACAAAAGTGGAGCTTTAAAATGGAAATCTGTGTTCTCTGATAAATCTGATCCTGCTGCAATGTGGGCTGCTATATTAGATCCTAATGGTGCAATCTCTTTTTATGATCTTAACGAGGGAAAATCTGTTTCCCCTGAAGCAACTAGGATACCACAAGATCCTTGTGGTATTGCTGAGCCTTGTGATCCTTATTATGTTTGCTTCTTTGAAAACTGGTGTGAGTGTCCTGCGCTTCTCAAATCTCGTTTCAATTGCAAGCCGCCTACGAACGCCACTTCGTCATGTCCTAGAACCCGAGAAGACCTTCTGTATGTCGGTGAAAAACTTGATTACTTCGCTCTCAAGTATGTTGAGCCGGTTTCTAAATCATCATCCTTAAGTGCTTGTAAAGAAGGCTGCTTAAGAAACTGCTCTTGCCTTGTGCTTTTCTTTGAAAACAGTACAGGAGAGTGCTACCATTTTGATCAGACCGGTAGTTTCCAACGCTCTAAGGCTAATTCTGGAGGCTATGTTTCGTTCATGAAGATCTCTATTGAAGATGGAGATGGAAGAAAAGGAAGGAATCACACTCTACTAAGCATTGTTGTAGTTATTTTCACAATTCTGATTGTCATTGGACTTGTGTTAGGATTCTGGTATTACTACAAAAACAAGCATCTCTTAGAGGATTCTCCAGAAACATTGGAGGAAGATGATTTCTTGGACAATCTTCATGGTATGCCGACTCGTTTCAGGTATAGTACTCTAAGCCAAGCCACAAAGAATTTCTCTACGAAAATTGGTGAAGGAGGGTTTGGCTCGGTTTATCTAGGCGTGCTTGAAGATGGATCACAATTGGCTGTGAAGAAACTTGAGGGATTAGGACAAGGGACAAAAGAGTTCAAAGCTGAAGTTTCTAGCATTGGTAGTATCCACCATGTTCATCTGGTGAAGCTTAGGGGCTTCTGCGCTGAAGGCCCTCATCGCCTTCTCGTGTACGAGTACATGGAAAGAGGCTCTCTGAACAAATGGATCTTTAGAAGCCATGAAAATGCCTTCTTGCTGAATTGGAACACCAGATTCAACATTGCATTAGGCACAGCAAGAGGATTGGCCTATCTTCACGAGGAGTGTGAGGTGAAGATCATACATTGTGATATCAAACCAGAGAATGTCCTTCTCGATGAAAACTTCACGGCTAAAGTTTCAGACTTCGGTCTGTCCAAGCTCATGAGCCGCGAACAAAGCCATGTCTTCACAACACTGAGAGGAACAAGAGGGTATCTAGCACCGGAATGGATCACAAACTACGCAATCTCAGAGAAGAGTGATGTGTACAGCTATGGGATGGTACTGCTTGAGATTATCGGAGGAAGGAGGAATTATGACCAATGGCAAGGCTCAGAGAAAGCGCATTTTCCTTCGTACGCCTTCCGGATGATGGAAGAAGGAAAACTGAAGCAAGTTCTTGACCCAATGATAGACATTGAAGAGAATGATGAAAGAGCTTTTGCTGCAGCTAAGGTTGCTCTATGGTGTATACAAGATGACATGAGTTTAAGGCCTCCAATGACTAAGGTTGTTCAAATGCTTGAAGGTGTTATCCCGGTCCCTGAGCCGCCATCATTATCCTCTTCAAGTTCTTATTCATCATTCCTTAAAATGTGTAGTGAGCAAGCTTCTTCATCCTCACAGGCTTCTTTTTACAGTAATGTACCCTTATCTTGTGTTCAGTTATCTGGTCCTAGATGA 2418 0.4144 MSLYRSGTLFIFVFFLLRLCLADHQHISHIDPRFEASQLDWNDHGGLFLLSNNSVFGFGFFGTLDVSLFVLVVLHLKSYKVVWTANRGLLVRNSDKFVFDNTGNAYLERQGVVVWATNTGGRKVRALELEDSGNLVIIDEARRVIWESFSHPTDTLLPNQLFVEGMGLKSFPNRNNLLSYLTFMSGDLVLYAGYDPPQIYWSLSSESNNVSKGVHFHSARLVSNSWNFYDKSGALKWKSVFSDKSDPAAMWAAILDPNGAISFYDLNEGKSVSPEATRIPQDPCGIAEPCDPYYVCFFENWCECPALLKSRFNCKPPTNATSSCPRTREDLLYVGEKLDYFALKYVEPVSKSSSLSACKEGCLRNCSCLVLFFENSTGECYHFDQTGSFQRSKANSGGYVSFMKISIEDGDGRKGRNHTLLSIVVVIFTILIVIGLVLGFWYYYKNKHLLEDSPETLEEDDFLDNLHGMPTRFRYSTLSQATKNFSTKIGEGGFGSVYLGVLEDGSQLAVKKLEGLGQGTKEFKAEVSSIGSIHHVHLVKLRGFCAEGPHRLLVYEYMERGSLNKWIFRSHENAFLLNWNTRFNIALGTARGLAYLHEECEVKIIHCDIKPENVLLDENFTAKVSDFGLSKLMSREQSHVFTTLRGTRGYLAPEWITNYAISEKSDVYSYGMVLLEIIGGRRNYDQWQGSEKAHFPSYAFRMMEEGKLKQVLDPMIDIEENDERAFAAAKVALWCIQDDMSLRPPMTKVVQMLEGVIPVPEPPSLSSSSSYSSFLKMCSEQASSSSQASFYSNVPLSCVQLSGPR 805
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr19g00104 805 ProSiteProfiles Bulb-type lectin domain profile. 34 150 IPR001480 -
Accr19g00104 805 SMART serkin_6 483 757 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr19g00104 805 Pfam PAN-like domain 347 402 IPR006583 -
Accr19g00104 805 Pfam D-mannose binding lectin 81 160 IPR001480 -
Accr19g00104 805 CDD B_lectin 45 152 IPR001480 -
Accr19g00104 805 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 41 765 - -
Accr19g00104 805 SUPERFAMILY alpha-D-mannose-specific plant lectins 79 203 IPR036426 -
Accr19g00104 805 ProSitePatterns Serine/Threonine protein kinases active-site signature. 604 616 IPR008271 GO:0004672|GO:0006468
Accr19g00104 805 Pfam Protein kinase domain 486 751 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr19g00104 805 Gene3D - 43 151 IPR036426 -
Accr19g00104 805 ProSiteProfiles Protein kinase domain profile. 483 757 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr19g00104 805 SMART blect_4 40 152 IPR001480 -
Accr19g00104 805 PIRSF SRK 3 802 IPR024171 GO:0004674
Accr19g00104 805 FunFam serine/threonine-protein kinase PBS1-like 452 557 - -
Accr19g00104 805 CDD PAN_AP_plant 349 406 - -
Accr19g00104 805 Gene3D Phosphorylase Kinase; domain 1 454 557 - -
Accr19g00104 805 FunFam S-receptor-like kinase 5 558 762 - -
Accr19g00104 805 ProSiteProfiles PAN/Apple domain profile. 324 406 IPR003609 -
Accr19g00104 805 SUPERFAMILY Protein kinase-like (PK-like) 467 754 IPR011009 -
Accr19g00104 805 ProSitePatterns Protein kinases ATP-binding region signature. 489 512 IPR017441 GO:0005524
Accr19g00104 805 Gene3D Transferase(Phosphotransferase) domain 1 558 757 - -
Accr19g00104 805 CDD STKc_IRAK 489 755 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr19g00104 425 763 Receptor kinase-like Gene Family AT5G20050 46.260 2.00e-93 298
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Accr19g00104 Pkinase 1.9e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr19g00104 - - psat:127087581 1145.18