Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr19g00093 ATGGTGCAATCAAAGAAGTTCAGAGGTGTCAGACAGCGTCATTGGGGCTCATGGGTTTCCGAGATTCGACATCCTTTATTGAAAAGAAGGGTGTGGCTAGGGACGTTTGATACTGCAGAAGAAGCAGCACGAGCATACGATGAAGCAGCCATTTTGATGAGTGGTAGAAACGCCAAAACAAACTTCCCAGTGGTGTCAAACAATAATAACAAAAACAATCAAAATCACCATTCATCCTCATCGTCTTCATCTTCTTCCCCGTCACCTTTTTCTGAAGCTCTCAGTGCAAAGCTTCGGAAGTGCTGTAAATCGCCATCTCCATCTCTCACTTGCTTGAGGCTGGACACAGAGAATTGTCATATCGGAGTGTGGCAGAAGCGAGCAGGGCCTCGTTCTGACTCCAACTGGGTCATGATGGTGGAGCTGGAAAGGAAGAAACTTGAAGTCTCAGAGATGACGGCGACAACAGAGTCACCCGCGCCGGAGACGGAGACGGAGACGGAGACAGAGGAAGAGAAGGTGAAGCCAGAAGAAGAAGAAGAAGAAGAAGACAACGGTCATGATGACCTGGACGAAGAACAGAAGATGGCGTTGCAGATGATCGAAGAACTGCTTAATCGGAACTGA 627 0.4801 MVQSKKFRGVRQRHWGSWVSEIRHPLLKRRVWLGTFDTAEEAARAYDEAAILMSGRNAKTNFPVVSNNNNKNNQNHHSSSSSSSSSPSPFSEALSAKLRKCCKSPSPSLTCLRLDTENCHIGVWQKRAGPRSDSNWVMMVELERKKLEVSEMTATTESPAPETETETETEEEKVKPEEEEEEEDNGHDDLDEEQKMALQMIEELLNRN 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr19g00093 208 CDD AP2 5 65 IPR001471 GO:0003700|GO:0006355
Accr19g00093 208 MobiDBLite consensus disorder prediction 62 91 - -
Accr19g00093 208 FunFam Ethylene-responsive transcription factor 2 5 64 - -
Accr19g00093 208 Pfam AP2 domain 6 54 IPR001471 GO:0003700|GO:0006355
Accr19g00093 208 MobiDBLite consensus disorder prediction 149 208 - -
Accr19g00093 208 SUPERFAMILY DNA-binding domain 6 64 IPR016177 GO:0003677
Accr19g00093 208 Gene3D AP2/ERF domain 5 65 IPR036955 GO:0003700|GO:0006355
Accr19g00093 208 SMART rav1_2 6 69 IPR001471 GO:0003700|GO:0006355
Accr19g00093 208 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 3 176 - -
Accr19g00093 208 Coils Coil 187 208 - -
Accr19g00093 208 PRINTS Ethylene responsive element binding protein signature 29 45 IPR001471 GO:0003700|GO:0006355
Accr19g00093 208 PRINTS Ethylene responsive element binding protein signature 7 18 IPR001471 GO:0003700|GO:0006355
Accr19g00093 208 ProSiteProfiles AP2/ERF domain profile. 6 63 IPR001471 GO:0003700|GO:0006355
Accr19g00093 208 MobiDBLite consensus disorder prediction 163 189 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr19g00093 1 208 AP2-EREBP Transcription Factor Family AT1G15360 61.682 4.22e-80 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Accr19g00093 AP2 1.8e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr19g00093 - - zju:107407598 247.669