Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr19g00078 ATGTACGGGAGAAAAGCGTGCCAACTTGTTAAAGAGCTAGCTAGTGGGGAGAAAGGCCAGTTGACGCCATTCAATAGCGATCTATTTGAACAAGTAGTTGCAGAATGCACTCAACATCACCTTGAGCTTCAAGCCTTGATAAGAAAGATGCAGGAAGAAGGGTTGGATGTCCAAACAACTAGAAATGCGGAACACCACGGCGCACTTATTCGTCATCTTTCTTTAGTTCGCAATAAACGCTGCCTAATGGCCTATGTTTACAATCGAGCCGAGACAATACAAAGTTTTTTATGGAAAATTGGACATGTACTTCCTCAAGAAATTGAGGAGAAGCTTTGTCATCTGGAGGTAGAGTATTTTAAGAAGCATTCAGCGGCTTTGAAATCATATATGTCAAAAATGCAACTTGATCTAACTGTGGATATGGTGCCGCCGAAAGATCCCTATATCCAAGTGAGGGTCCTCGATGATATTGGTGATGGGATTGTTCTTAGCGATGACAAGACTGCCAATTTTGCCCGCCATTCAATGCATTTTCTGAAGCGAACTGATGCAGAGCAATTTATCTCACGGGGGTTAATGGAGGAGCTCACAGGCTGA 600 0.4317 MYGRKACQLVKELASGEKGQLTPFNSDLFEQVVAECTQHHLELQALIRKMQEEGLDVQTTRNAEHHGALIRHLSLVRNKRCLMAYVYNRAETIQSFLWKIGHVLPQEIEEKLCHLEVEYFKKHSAALKSYMSKMQLDLTVDMVPPKDPYIQVRVLDDIGDGIVLSDDKTANFARHSMHFLKRTDAEQFISRGLMEELTG 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr19g00078 199 CDD GINS_B_Psf1 148 197 - -
Accr19g00078 199 CDD GINS_A_psf1 3 136 IPR005339 GO:0000811|GO:0006260
Accr19g00078 199 Pfam GINS complex protein 43 116 IPR021151 -
Accr19g00078 199 SUPERFAMILY GINS helical bundle-like 1 146 IPR036224 -
Accr19g00078 199 Gene3D - 1 134 - -
Accr19g00078 199 PANTHER PARTNER OF SLD5 1 198 IPR005339 GO:0000811|GO:0006260
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr19g00078 1 199 Core DNA Replication Machinery Family AT1G80190 68.812 1.89e-103 295
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr19g00078 K10732 - qsa:O6P43_027860 348.591