Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr19g00034 ATGTCGCCGGAGAGTACTGGCACCGCTCGATCCGCGATGTCCGACGTCACAGAGTTAAACCTGAAGGAGACGGAGCTCACCCTCGGCCTTCCCGGCACCAATAATATCACTACTAGCTCTAAACGTGCCTTCTCGGAAACCACCGTCTTCACCCCAACGTCGTCGTCAACTAGTAACCCAGCACCTAAGGCACAGGCGGTGGGATGGCCGCCGGTGAGGGCAAGCCGGAAGAACGCGATGAGGGGCTGCAAGTACGTGAAGGTGGCTGTGGACGGAGCTCCATATCTGAGGAAGGTAGATCTTGAGAAGTATGAGAGCTATGATCAGCTGCTTACGGGTTTAGAGGCCATGTTTGGTTCCTTGACAATTCGCAATCACCTTGGGAATGGGGCAGAGTACATGCCCACGTATGAGGACAAAGACGGTGACTGGATGCTCGTGGGAGATGTACCTTGGAAAATGTTTGTTGAATCCTGCAAAAGAATCAGATTGCTAAAGTCAGAGGCCAGTGGCTTAGAAATTCGAAGAACAGAGTTGAAGTTGAAGGAGAAAACGTGTGGTAATTAA 567 0.5168 MSPESTGTARSAMSDVTELNLKETELTLGLPGTNNITTSSKRAFSETTVFTPTSSSTSNPAPKAQAVGWPPVRASRKNAMRGCKYVKVAVDGAPYLRKVDLEKYESYDQLLTGLEAMFGSLTIRNHLGNGAEYMPTYEDKDGDWMLVGDVPWKMFVESCKRIRLLKSEASGLEIRRTELKLKEKTCGN 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr19g00034 188 ProSiteProfiles PB1 domain profile. 83 167 IPR000270 GO:0005515
Accr19g00034 188 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 18 169 IPR003311 GO:0005634|GO:0006355
Accr19g00034 188 Coils Coil 162 182 - -
Accr19g00034 188 Pfam AUX/IAA family 52 173 IPR033389 -
Accr19g00034 188 Gene3D - 77 177 - -
Accr19g00034 188 SUPERFAMILY CAD & PB1 domains 75 164 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr19g00034 61 182 B3 DNA Binding Superfamily AT3G61830 31.967 1.06e-10 58.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Accr19g00034 AUX_IAA 2e-41 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr19g00034 K14484 - gmx:100500488 210.69