Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr19g00033 ATGGCTCTCGGACTCGAAATCACGGAGCTTAGGCTGGGTCTTCCAGGCCGCGGTGGGGATGAAGATCAGAACAAGAGTGCTACTGAGATGACCAACAAGAAGAGGGTGTTCTCGGAGATTGGCCTTGTTGATGGTGGTGGTGGTGGTGAGGATGAGAATAGCTGCTCTGGTGACAGGAAGACGCCGGCAAAGAGCCCGGTTGTGGGGTGGCCGCCGGTGGGGTCCTACCGGAGGAGGAATAGCATGAGTGAACCCAAAATTTACGTGAAGGTTAGTATGGATGGAGCTCCTTTCTTGAGAAAGGTTGATTTGGGTTTGCAAAAGGGCTACTCTGAGTTAGCTTCAGCCTTGGAGAAGCTCTTTGATTGCCATGGAATCGGAGAGGCATTGAAGGGAGTGGACAATTCTGAAGTCGTTCCCATTTATGAGGACAGGGATGGTGACTGGATGCTTGTTGGAGATGTCCCTTGGGAAATGTTTATTGAGTCATGCAAGAGGCTGAGGATCATGAGGAGATCGGAGGCAAAAGGGTTTGATCTGCAGCCAAAAGGGTCTTTGAATGGCAAAAAGGAGTGA 576 0.5087 MALGLEITELRLGLPGRGGDEDQNKSATEMTNKKRVFSEIGLVDGGGGGEDENSCSGDRKTPAKSPVVGWPPVGSYRRRNSMSEPKIYVKVSMDGAPFLRKVDLGLQKGYSELASALEKLFDCHGIGEALKGVDNSEVVPIYEDRDGDWMLVGDVPWEMFIESCKRLRIMRRSEAKGFDLQPKGSLNGKKE 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr19g00033 191 MobiDBLite consensus disorder prediction 15 29 - -
Accr19g00033 191 Gene3D - 81 183 - -
Accr19g00033 191 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 4 176 IPR003311 GO:0005634|GO:0006355
Accr19g00033 191 FunFam Auxin-responsive protein 81 182 - -
Accr19g00033 191 SUPERFAMILY CAD & PB1 domains 80 170 - -
Accr19g00033 191 MobiDBLite consensus disorder prediction 12 31 - -
Accr19g00033 191 MobiDBLite consensus disorder prediction 40 75 - -
Accr19g00033 191 Pfam AUX/IAA family 30 178 IPR033389 -
Accr19g00033 191 ProSiteProfiles PB1 domain profile. 86 174 IPR000270 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr19g00033 89 176 B3 DNA Binding Superfamily AT4G23980 44.318 1.66e-13 66.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Accr19g00033 AUX_IAA 4e-43 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr19g00033 K14484 - gmx:547784 243.817