Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr19g00020 ATGGAGAAAGTGGGAGATATCATATGGGACATAACAAAGTGCTTTTGTGGTCGCGCCAAACGACAAGATGACTTTATGCGTGACTTGGAAGAGAACCTTCAGTTCGTGGAAGCTAAATGGAAAGATCTTGAAGCAATGAAGAATGATGTGGAAGCAAAAATTATAGTAGATGAAGAAACAGGAGAGATGCAAAGGTCACATGCTGTCAGTTTATGGTTCGAAAGTATCCAAAACATTCAAGAGGACATAGCAAAAATTCGAGTTAAAGCCCAAAAAATCCAAAACGACTGCGTACATAGATGTGGTGTAATGTATTGGTCGTCAAGCTCCCCATTGCAATTGGGAAAGGAAGTTGCCAAGAAGCTCCGTGAACTAGAAGATCTAAACACCAAAGGACGACTAAGGTTTGGTGGACATTATCAAATTACTTACAAGCTGCCACGTAAGCCGATTCATCAAATTACTCAAGATAACCAGGTTCCACTTGTACCTCCACCATCTTCCATGGTCTTTGAACACTCACCATGCACATTTACGTATGAACAATTAGAATTGGCAACAGAAGGGTTCTCAGAGTCAAATTTTCTGGGGCAAGGTGGTTTTGGGCCTGTCCACAAAGGAATCCTCCCTAATAAACAAACTGTAGCCATTAAGCAGCAAAAATCTGGAAGCAAACAAGGAATGCAAGAGTTTCAGATTGAAGTCAACGTGATTAGTCGAGTCCATCACAGGCATCTTGTTTCCCTTGTTGGATACTGTATTGCTAAAGCTCAGATGACGATGATGCTTGTTTATGAGTTTGTCCCAAATAAATCCTTAGACTTTCATCTCCATGAAAAAGGCACACAAACTCTAGATTGGTCAACAAGGATGAAGATTGCTAATGGCTCTGCAAAAGCATTGGCATATCTGCATGACGACTGTCAACCCAAAATCATACATCGTGATATCAAGGCAGCTAACATTCTTCTTGATGACAAGTTTGAGCCTAAGATTGCAGATTTTGGACTTGCCAAACTTTCATCAGACACTGATACCCATGTCTCTACAGCTATAAAGGGAACTTTTGGATACCTAGCTCCAGACTATGCAGCTAGCAGGAGACTCTCAGAGAAGGCAGATGTCTATTCCTTTGGTGTTGTGCTCTTAGAGTTGATTGCTGGACAAAAACCTATTCTTGAAACTGGCTCTTTCCCAGATAACAGTCTAGTTGAGCGGGCAAGGCTTTTACTACCCACGGCTTTGAAGGATCGAAATTTTGAGGTTCTAGCTGATCCAAGGTTGCAGAATAATTACAACTCTGAAGAGATGTTTCGAATGGCTTCTTGTGCTGCAAAGTGCGTGCGTTATTTACCCGACCATCGTCCTCAAATGAGCCAGGTAATGGATGCTTTAACAGGAAAGATTAATCTGGATAATTGGAACGAGGAGAGCACACAAGTGGACAACCATGACCTGAACAAGTTTGGGAAGCAGTCACTAGGCGAGTCCAATGAGTCTACCAGTTCAAGCCTCGAAAATACAACTGAAGCCTCTTCTCACTCAGCTTCTGGTTAA 1557 0.4207 MEKVGDIIWDITKCFCGRAKRQDDFMRDLEENLQFVEAKWKDLEAMKNDVEAKIIVDEETGEMQRSHAVSLWFESIQNIQEDIAKIRVKAQKIQNDCVHRCGVMYWSSSSPLQLGKEVAKKLRELEDLNTKGRLRFGGHYQITYKLPRKPIHQITQDNQVPLVPPPSSMVFEHSPCTFTYEQLELATEGFSESNFLGQGGFGPVHKGILPNKQTVAIKQQKSGSKQGMQEFQIEVNVISRVHHRHLVSLVGYCIAKAQMTMMLVYEFVPNKSLDFHLHEKGTQTLDWSTRMKIANGSAKALAYLHDDCQPKIIHRDIKAANILLDDKFEPKIADFGLAKLSSDTDTHVSTAIKGTFGYLAPDYAASRRLSEKADVYSFGVVLLELIAGQKPILETGSFPDNSLVERARLLLPTALKDRNFEVLADPRLQNNYNSEEMFRMASCAAKCVRYLPDHRPQMSQVMDALTGKINLDNWNEESTQVDNHDLNKFGKQSLGESNESTSSSLENTTEASSHSASG 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr19g00020 518 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 166 267 - -
Accr19g00020 518 FunFam proline-rich receptor-like protein kinase PERK8 268 480 - -
Accr19g00020 518 SMART serkin_6 190 466 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr19g00020 518 SUPERFAMILY Protein kinase-like (PK-like) 164 465 IPR011009 -
Accr19g00020 518 Coils Coil 76 96 - -
Accr19g00020 518 Gene3D Phosphorylase Kinase; domain 1 157 267 - -
Accr19g00020 518 Coils Coil 26 53 - -
Accr19g00020 518 MobiDBLite consensus disorder prediction 486 518 - -
Accr19g00020 518 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 158 492 IPR047117 -
Accr19g00020 518 Gene3D Transferase(Phosphotransferase) domain 1 268 491 - -
Accr19g00020 518 ProSiteProfiles Protein kinase domain profile. 190 471 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr19g00020 518 Pfam Protein tyrosine and serine/threonine kinase 194 465 IPR001245 GO:0004672|GO:0006468
Accr19g00020 518 ProSitePatterns Serine/Threonine protein kinases active-site signature. 312 324 IPR008271 GO:0004672|GO:0006468
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr19g00020 166 502 Trihelix Transcription Factor Family AT1G70460 53.757 6.71e-116 356
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Accr19g00020 PK_Tyr_Ser-Thr 1.6e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr19g00020 - - pcin:129289307 412.535