Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr19g00007 ATGGATGACACTGAAGATGATGCAAAGTATGCTCCTAACCCATATGATGTAAGTCATCACCAAGATTATGGTTATTCAAATAGTCACAAACATCCAGTTGGGAGTTCTCAACATTCTCAGCCAGTTAGAAGTGAGTCTGTTGAAGAAGATAATGATTATGAGGAAGAAGACAACGGAGAACAGTTAGAACAGGAAGAAGAAGAAGAAGAAGACGACGAAGAAGAAGATAATGATGATGATGATGATGTTGATGTTGATCAAAGTAACAGCAATCAAGTTCCCCAGAAAGATGGCAACAACAATGGTGATGACGAAGAGGATGATGACATTGATGAGAATGGGGATGAGGATGAGGATGATAGTGATGATGACACTGCTGCTGCTAATGATGATAAGCTGAAAAGTTACACCATAAGGATTGGAGATGATTTAGAATCTCACCCAAAAAAGAGAAAGCTGAAGAGTTTGATTTCAACTTATGAATTTGCACCTCGTGTGCCTGCACCAGCAGCTGCAGCTCCTTCAGCTTCTAAACCATCATTTGGTGGCAGAAATTCCCTTACTGACTGGACTGAGCACGAGACATTTGTTCTTCTTGATGCTTGGGGTGAGCGGTTTATTCAGCGTGGTAAAAAGAGTCTCCGATCTGAGGAATGGCATGAAGTTGCAGAAAGGGTAAAAGAAGTTTCAAAAATTGAGAGGACAGATACTCAGTGTAGGAATAGACTTGACACGTTAAAGAAAAAGTACAAAAAGGAGAAGGCCAAATTTGCTGAAACGGGTAGCGGAACCAGCAAATGGGTTTATTTTAATAGGCTTGATAAGCTGTTGTCCTCTCCTCAACAACAAGCTGGTCTATCTTGTGGTTTGGACTCAGGAGAGTATGTTTTCTCGAACCCTCGAGTTTATTTGAACCGTGCAAATGTGTTTGATGAAATGAGGGATAGTCCAGGGAATTCAGAGTCTAATGGTGAGGAAGACTCAGTTGGACTTCAACCAAAGAATAAAAGTTCTAGAAGGAACAATGACGAGACTTCTTCCTTCAAATTACTTGCTGATTCCATTCAGAAATTCAGCGAGATATATGAGAAGATTGAAAATAACAAAAGGCAACAGATGGCGGAACTAGAAAAGATGAGGATGGAGTTCCACAAGGATTTGGAAATGCAGAAGAGGCAAATTTTCGAGAGAGTGCAGAAGGAGATTGTGAAACTGCAGCAGAGAGATGAGGAGGAAAAAGACGAATCTGCTGAGAATGGTATGTGA 1266 0.4076 MDDTEDDAKYAPNPYDVSHHQDYGYSNSHKHPVGSSQHSQPVRSESVEEDNDYEEEDNGEQLEQEEEEEEDDEEEDNDDDDDVDVDQSNSNQVPQKDGNNNGDDEEDDDIDENGDEDEDDSDDDTAAANDDKLKSYTIRIGDDLESHPKKRKLKSLISTYEFAPRVPAPAAAAPSASKPSFGGRNSLTDWTEHETFVLLDAWGERFIQRGKKSLRSEEWHEVAERVKEVSKIERTDTQCRNRLDTLKKKYKKEKAKFAETGSGTSKWVYFNRLDKLLSSPQQQAGLSCGLDSGEYVFSNPRVYLNRANVFDEMRDSPGNSESNGEEDSVGLQPKNKSSRRNNDETSSFKLLADSIQKFSEIYEKIENNKRQQMAELEKMRMEFHKDLEMQKRQIFERVQKEIVKLQQRDEEEKDESAENGM 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr19g00007 421 Coils Coil 55 79 - -
Accr19g00007 421 MobiDBLite consensus disorder prediction 48 86 - -
Accr19g00007 421 Coils Coil 395 415 - -
Accr19g00007 421 MobiDBLite consensus disorder prediction 127 151 - -
Accr19g00007 421 MobiDBLite consensus disorder prediction 313 345 - -
Accr19g00007 421 Coils Coil 355 393 - -
Accr19g00007 421 Gene3D - 190 252 - -
Accr19g00007 421 MobiDBLite consensus disorder prediction 101 126 - -
Accr19g00007 421 MobiDBLite consensus disorder prediction 322 336 - -
Accr19g00007 421 Pfam Myb/SANT-like DNA-binding domain 189 276 IPR044822 -
Accr19g00007 421 MobiDBLite consensus disorder prediction 1 151 - -
Accr19g00007 421 ProSiteProfiles Myb-like domain profile. 190 247 IPR001005 -
Accr19g00007 421 FunFam trihelix transcription factor ASIL2 190 252 - -
Accr19g00007 421 MobiDBLite consensus disorder prediction 28 42 - -
Accr19g00007 421 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 177 411 IPR044823 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr19g00007 351 407 Trihelix Transcription Factor Family AT3G14180 49.123 1.56e-10 60.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Accr19g00007 Myb_DNA-bind_4 3.8e-21 CL0123