Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr19g00006 ATGAGCGTGGTCGGTTTTGACTTTGGTAATGAGAGCTGCATTGTTGCTGTTGCAAGGCAGAGAGGGATCGATGTCGTGCTCAATGATGAGTCCAAACGAGAAACTCCGGCAGTTGTGTGTTTTGGTGATAAGCAACGGTTTATTGGAACAGCTGGGGCTGCATCTACTATGATGAACCCAAAGAATTCAATCTCACAGATCAAGCGACTAATTGGTCGACAGTTCTCTGACCCAGAGTTGCAGCGGGATCTGAAGTCATTGCCTTTTGTGGTGACTGAAGGGCCTGATGGCTATCCATTAATTCATGTGAGGTATTTGGGTGAAAATAAAACATTTACACCAACACAAGTGCTGGGAATGGTGTTCTCAGATCTTAAAGGCATAGCTGAGAAGAATCTGAAGGCAGCAGTTGTTGATTGTTGCATTGGAATTCCGGTTTATTTCACTGATCTTCAGAGAAGGGCGGTTTTGGATGCAGCTACCATTGCAGGTTTGCACCCACTTCGCCTGATTCATGAAACAACAGCGACTGCCTTGGCCTATGGAATTTATAAGACAGATCTCCCTGAAAATGATCAACTAAATGTTGCATTTGTGGATGTTGGGCATGCCAGCATGCAAGTGTGCATTGCTGGATTTAAGAAGGGGCAGCTGAAAGTTCTGGCTCATTCATTTGATAGATCTCTTGGTGGTAGGGATTTTGACGAGGTTTTGTTCCATCACTTTTCTGCAAAGTTCAAGGAAGAGTACAAGATTGATGTTTTCCAGAATGCCAGGGCTTGTCTAAGGCTAAGAGCTGCTTGTGAGAAGCTGAAGAAGGTGCTCAGTGCAAATCCTGAAGCACCTCTTAATATTGAATGCTTGATGGACGAGAAAGACGTTAGGGGCTTGATCAAGCGTGACGAATTTGAACAATTAAGTGTTCCAATATTGGAACGTGTTAAAAAACCTTTGGAGAAGGCTCTTGCAGAAGCAGGTCTTACAGTTGAGAATGTACATATGGTCGAGGTAATTGGTTCAGCTTCTCGCATACCAGCTATAAACAAGATATTGACTGAGTTTTTCAAGAAGGAACCTAGGCGGACAATGAATGCAAGTGAGTGTGTTGCCAAGGGTTGTGCCTTGCAATGTGCTATTCTTAGTCCAACATTTAAAGTACGAGAGTTTCAGGTTAATGAAAGCTTTCCTTTCCCAATTTTTCTATCATGGAAAGGTTCTGGTCCAGATCTACAGGAGAATGAACCAGATAAGCAGATGAATACTGTTGTTTTCTCTAAAGGAAATATCATACCAAGCATCAAGGCTCTGACATTCTTTAGGTCAGAAACATTTTCTGTTGATATACAGTATGCTGATGTGAGTGAGGTGCAGGCACCTCCAAAGATCAGCACATATACGATTGGTCCTTTGCCGTCTACAAAAGTTGAGAAAGCAAAAATTAAACTGAGAGTACGATTGAATCTGCATGGAATTGTATCCGTTGACTCGGCAACTCTTCTAGAGGAGGAGGAAGTTGAGGTTCCAGTTGTCAAAGTAACAGCTGGAGAAAGTGCCAAGATGGACACTGATGAAGTTCCTGCTGAAGCCGCTGCTGCTGCTGAGGCCGCTGCAGCCCCTCCAAGCTCCAATGATGCTGATGCTGATATGGAAGATGCCAAGGCAACTGCTGATGCCCCTGGATTGGAAAATGGCAATTCTGAGACTGGGGATAAGCCTGTGCAGATGGAGACTGATACCAAGGTTGAGGCTCCAAAGAAAAAGGTCAAGAAAACAAACATACATGTGACAGAGTTGGTATATGGTGCACTGAGTCATTCAGATGTCCAGAAAGCTGTAGAGAAGGAGTTTGAAATGGCTTTGCAAGATCGAGTTATGGAAGAAACAAAAGAAAAGAAGAATGCTGTTGAGGCTTATGTTTATGACATGAGAAACAAGCTCTGTGACAAATACCAAGATTTTGTCGCTGACTCGGAGAAAGAGGCACTTACTACTAGACTTCAGGAGGTGGAAGACTGGTTATATGAAGATGGTGAGGATGAAACTAAAGGTGTCTATGTTGCCAAACTTGAGGAACTGAAGAAGCAAGGTGATCCAATTGAAGAGCGTTACAAGGAGTACATGGAGAGGGGCACAGTAATCAATCAGTTGATTTATTGTATTACTAGCTACAGGGAAGCTGCAATGTCAAACGATCCCAAATTTGATCACATTGACATTTCTGAGAAACTGAAGGTCCTCAATGAATGTGTTGAAGCCGAAGCTTGGCTTAGGGAGAAGCAGCAGCAGCAGGACTCTCTTCCAAAATATGCTAACCCTGTACTCTTGTCGGCTGAAGTAAGAAAGAAAGCCGAGGCAGTCGATAGGTTCTCTAAGCCAATTATGACAAAACCAAGGCCAGCCAAGCCGGCTACTCCTGAAGCGCCAGCAACACCTCAGCCTCCTCCTCAGGGTGGTGAGCACCAGCAACCTCTGGAAGACGCTAATGCAGGCGACAACACAGACCAGGCCCCACCAGAGTCGACTGATGAACCAATGGAGACTGATAAGTCAGAAAATTCAGGCGCAGCATAA 2571 0.4434 MSVVGFDFGNESCIVAVARQRGIDVVLNDESKRETPAVVCFGDKQRFIGTAGAASTMMNPKNSISQIKRLIGRQFSDPELQRDLKSLPFVVTEGPDGYPLIHVRYLGENKTFTPTQVLGMVFSDLKGIAEKNLKAAVVDCCIGIPVYFTDLQRRAVLDAATIAGLHPLRLIHETTATALAYGIYKTDLPENDQLNVAFVDVGHASMQVCIAGFKKGQLKVLAHSFDRSLGGRDFDEVLFHHFSAKFKEEYKIDVFQNARACLRLRAACEKLKKVLSANPEAPLNIECLMDEKDVRGLIKRDEFEQLSVPILERVKKPLEKALAEAGLTVENVHMVEVIGSASRIPAINKILTEFFKKEPRRTMNASECVAKGCALQCAILSPTFKVREFQVNESFPFPIFLSWKGSGPDLQENEPDKQMNTVVFSKGNIIPSIKALTFFRSETFSVDIQYADVSEVQAPPKISTYTIGPLPSTKVEKAKIKLRVRLNLHGIVSVDSATLLEEEEVEVPVVKVTAGESAKMDTDEVPAEAAAAAEAAAAPPSSNDADADMEDAKATADAPGLENGNSETGDKPVQMETDTKVEAPKKKVKKTNIHVTELVYGALSHSDVQKAVEKEFEMALQDRVMEETKEKKNAVEAYVYDMRNKLCDKYQDFVADSEKEALTTRLQEVEDWLYEDGEDETKGVYVAKLEELKKQGDPIEERYKEYMERGTVINQLIYCITSYREAAMSNDPKFDHIDISEKLKVLNECVEAEAWLREKQQQQDSLPKYANPVLLSAEVRKKAEAVDRFSKPIMTKPRPAKPATPEAPATPQPPPQGGEHQQPLEDANAGDNTDQAPPESTDEPMETDKSENSGAA 856
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr19g00006 856 SUPERFAMILY Actin-like ATPase domain 1 185 IPR043129 -
Accr19g00006 856 Gene3D - 603 713 IPR029048 -
Accr19g00006 856 Coils Coil 689 709 - -
Accr19g00006 856 FunFam Heat shock 70 kDa protein 4 230 313 - -
Accr19g00006 856 SUPERFAMILY Actin-like ATPase domain 195 380 IPR043129 -
Accr19g00006 856 FunFam Heat shock 70 kDa protein 4 603 713 - -
Accr19g00006 856 MobiDBLite consensus disorder prediction 826 840 - -
Accr19g00006 856 MobiDBLite consensus disorder prediction 518 586 - -
Accr19g00006 856 PANTHER HSC70CB, ISOFORM G-RELATED 1 848 - -
Accr19g00006 856 CDD HSPA4_like_NDB 2 381 - -
Accr19g00006 856 MobiDBLite consensus disorder prediction 798 818 - -
Accr19g00006 856 MobiDBLite consensus disorder prediction 788 856 - -
Accr19g00006 856 PRINTS 70kDa heat shock protein signature 2 15 - -
Accr19g00006 856 PRINTS 70kDa heat shock protein signature 30 42 - -
Accr19g00006 856 PRINTS 70kDa heat shock protein signature 363 383 - -
Accr19g00006 856 PRINTS 70kDa heat shock protein signature 332 348 - -
Accr19g00006 856 PRINTS 70kDa heat shock protein signature 140 160 - -
Accr19g00006 856 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 604 703 IPR029048 -
Accr19g00006 856 Gene3D Actin; Chain A, domain 4 230 313 - -
Accr19g00006 856 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 384 636 IPR029047 -
Accr19g00006 856 Pfam Hsp70 protein 581 704 IPR013126 GO:0005524|GO:0140662
Accr19g00006 856 Pfam Hsp70 protein 3 540 IPR013126 GO:0005524|GO:0140662
Accr19g00006 856 Gene3D - 5 374 - -
Accr19g00006 856 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 714 801 IPR029048 -
Accr19g00006 856 Gene3D - 38 113 - -
Accr19g00006 856 Gene3D - 186 360 - -
Accr19g00006 856 FunFam Heat shock 70 kDa protein 4 104 213 - -
Accr19g00006 856 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 385 528 IPR029047 -
Accr19g00006 856 FunFam Heat shock 70 kDa protein 4 38 113 - -
Accr19g00006 856 FunFam Heat shock 70 kDa protein 4 1 77 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr19g00006 4 406 Calmodulin-binding Proteins AT1G16030 37.192 3.08e-85 283