Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr18g00159 ATGCTGGGGGACTCAACCGCGTTAGGAGGAGGTGGCGGAGCTAGCTCTGGAGATGATGCGGCGGCAGAGGCGGTTGCGGCTGCTGCTGCTGCTGCATCTGCGGGAGGTGGAGTTGCAGAGGCTCATGACGGTGGTGAGTCAGCAGTTGCGGCGTCGGGTAGCGGTGGTGGAGGAGGTGGATCGAATTCAGGAGAAGAGGGTGGTGGCGGTGACAGAAGCTTAGGCGGCAATCGGTGGCCCCGCCAGGAGACTCTGGCGCTCTTGAAGATACGCTCCGATATGGACGTGGCGTTTCGAGATGCCAGCGTTAAAGGTCCCTTGTGGGATGAGGTTTCCAGGAAGCTAGCAGAGCTTGGATATCACAGAAGTGCCAAGAAGTGTAAGGAGAAATTCGAGAACGTTTACAAGTACCACAAACGAACCAAAGAAGGCCGAACAGGAAAACCATACGGCAAAACGTACCGTTTCTTCGATCAGTTAGAAGCTCTCGATCATCATCATCAAAATACTAATTCTTTATTCATTCAATCCTCCTCTTCTAATTCTGCTCCTCTACCTGCACCACCCGTCTCCGTCATCCCCACCACCTATCCTCCTCCTTCAGTCATGGTGGCGCCACAAGTAATGCCACCGCCTCCTCCTCCGCAGCCTCCTCATGTTAATGCTGCTGCTGCTGCTGTTCCATCAATGAACACTACTACTTCAATCCCTCCATTGTACCCTCCACCACCAGCGTCAACAACGATAACACCAAACCCTACTTTTATACCTCCGTTCACGGGCATTCCGACGGATCTATTGTCAAATTCTAGTTCGTCTTCGACGTCGTCGGATGAGACGATAGAGGCACGGCGGAGGCGGAAGAGGAAGTGGAAGGACTTCTTCGAGAGGTTGATGAAGGAGGTGATAGAGAAGCAGGAGGAGCTTCAGAAGAGGTTTCTGGAAGCCATAGAGAAACGCGAGCACGAGAGAATGGCTAGAGAGGAATCCTGGAGAATGCAGGAGATGGCTAGGATCAATAAGGAGAGAGAAATATTGGCTCAGGAAAGATCCATTGCCGCCGCCAAAGACGCCGCTGTAATGGCCTTCTTGCAGAAGATCGCTGAACAACAGCAGAATCTCGGCCAACCGACACCGACCACAAACACCATTACCATCCCCAATCCTCCTCCTCCAACGTCGCAGCCCACTGCAGCTCCAGCCGCACCAGCACCTATAATTGCACCGCCGCCGCCGCAACCGACGGTGCAGCAATCAACTCCTGTTCTATCTACTCCTCCACCGCCCGCTCCGCAGCAACAAGGTATGACGAGCATGGAAATTGTGACGAAAAATGATAACGGCGATAGCAGTTATTTGGCGGCAACGACGACGCCGGGTACGTCATCGTCGAGGTGGCCGAAAGTGGAGGTAGAGACGCTGATAAAACTACGGACAGACCTTGAAGCCAAGTACCAGGAGAATGTGCCGAAGGGGCCATTATGGGAGGAAATCTCTGCCGCAATGAGGAGGCTGGGTTACAACCGTAGCTCAAAGAGGTGTAAGGAAAAGTGGGAGAACATAAACAAGTACTTCAAGAAGGTGAAAGAGAGCAACAAGAGAAGACCAGAAGATTCCAAGACGTGTCCGTATTTTCACCAGCTGGAATCTCTATACAGGGAGAAGAGTTTCAAGATGCAGGCAGCGCCGCGGCCGCCGCCGGAGAACATGATGTCTAGTCTGCCGCTCATGGTGCGCCCAGAGCAGCAGTGGCCGCCGCAGCCTCAGCCGCAGCAAGATACACGGCCGCCGGGGCCACCGCAGGTGATGATGGGAAGCGCGGGAAATGATGCGACGGAAGAAGACGAAGAAGATGATGACGATGATGATGGAGGAAGTGGTACCTACGAGATAGTGGCAAGCAAGCCAGCTACTTCAGTGGGTGCTTCTGAGTGA 1935 0.538 MLGDSTALGGGGGASSGDDAAAEAVAAAAAAASAGGGVAEAHDGGESAVAASGSGGGGGGSNSGEEGGGGDRSLGGNRWPRQETLALLKIRSDMDVAFRDASVKGPLWDEVSRKLAELGYHRSAKKCKEKFENVYKYHKRTKEGRTGKPYGKTYRFFDQLEALDHHHQNTNSLFIQSSSSNSAPLPAPPVSVIPTTYPPPSVMVAPQVMPPPPPPQPPHVNAAAAAVPSMNTTTSIPPLYPPPPASTTITPNPTFIPPFTGIPTDLLSNSSSSSTSSDETIEARRRRKRKWKDFFERLMKEVIEKQEELQKRFLEAIEKREHERMAREESWRMQEMARINKEREILAQERSIAAAKDAAVMAFLQKIAEQQQNLGQPTPTTNTITIPNPPPPTSQPTAAPAAPAPIIAPPPPQPTVQQSTPVLSTPPPPAPQQQGMTSMEIVTKNDNGDSSYLAATTTPGTSSSRWPKVEVETLIKLRTDLEAKYQENVPKGPLWEEISAAMRRLGYNRSSKRCKEKWENINKYFKKVKESNKRRPEDSKTCPYFHQLESLYREKSFKMQAAPRPPPENMMSSLPLMVRPEQQWPPQPQPQQDTRPPGPPQVMMGSAGNDATEEDEEDDDDDDGGSGTYEIVASKPATSVGASE 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr18g00159 644 ProSiteProfiles Myb-like domain profile. 458 522 IPR001005 -
Accr18g00159 644 ProSiteProfiles Myb-like domain profile. 71 135 IPR001005 -
Accr18g00159 644 FunFam Trihelix transcription factor GT-2 466 527 - -
Accr18g00159 644 PANTHER FI21293P1 47 600 - -
Accr18g00159 644 Pfam Myb/SANT-like DNA-binding domain 464 551 IPR044822 -
Accr18g00159 644 Pfam Myb/SANT-like DNA-binding domain 77 163 IPR044822 -
Accr18g00159 644 CDD GT1 77 142 - -
Accr18g00159 644 SMART sant 462 524 IPR001005 -
Accr18g00159 644 SMART sant 75 137 IPR001005 -
Accr18g00159 644 MobiDBLite consensus disorder prediction 1 78 - -
Accr18g00159 644 MobiDBLite consensus disorder prediction 383 433 - -
Accr18g00159 644 MobiDBLite consensus disorder prediction 610 626 - -
Accr18g00159 644 CDD GT1 464 529 - -
Accr18g00159 644 MobiDBLite consensus disorder prediction 374 435 - -
Accr18g00159 644 MobiDBLite consensus disorder prediction 558 644 - -
Accr18g00159 644 MobiDBLite consensus disorder prediction 581 597 - -
Accr18g00159 644 Coils Coil 292 319 - -
Accr18g00159 644 Gene3D - 466 527 - -
Accr18g00159 644 Gene3D - 79 140 - -
Accr18g00159 644 MobiDBLite consensus disorder prediction 446 465 - -
Accr18g00159 644 FunFam Trihelix transcription factor GT-2 79 140 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr18g00159 71 584 Trihelix Transcription Factor Family AT1G76880 54.259 9.48e-160 470
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Accr18g00159 Myb_DNA-bind_4 1.2e-21 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr18g00159 - - pdul:117637144 537.724