Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr18g00155 ATGGGTAGAAAGAAGCCGACTGCTCGTGACGATGATAATGTGCCCACTGCATCTCAAGGTGGTGGAAAGTCGAAAAAGAAGGGGCTAGTGGTTGATGATGATGAATATGCGGAGCTGTCTGAGGAACCTTTGGCTGAAGAAGAGAAGCCTGTGGCCGCCGGAAAGAAGAAAGGTAAAAAAGGTCACTCAAAGGCTTCAAAAGTCGAGGAAGAAGATTTAGAAATGGCGATGGATAATGATGATGATGTACCTGAGGTTGTGTTTACTGGGAAGAAGAAGGGGAAATCAAAAAAGGGCGGTGGCAACAGTGTGTTTACTGCTTCGAGCTTCGGTTTGCTTGGTGATGAGGAGGGTGGAGAAGATGATGATGATGACCAACAATCCGGCTTAACTGGTGGGGTGGACAATGACGACGAGGAGGAACCGGTTGTCAGTTTTTCAGGTAAGAAGAAGTCCTCAAAGGGTTCCAAGAAGAAGGGTGGTAGCTTGTTCACTGCATCAGCTTTTGATGCCATAGACGAAGATAATGAAGGGGAGGAGGTGATCGATAATTCTATGGAAGCCAGCCGTGAAGAGAATGATGACGATGAACCAGTTATTGCTTTTACGGGTAAGAAAAAATCGTCAAAAAGTAGCAAGAAGGCTGGTGCCTTATTCACAGCATCTAGTTTTGGTGATACTGACGGAGAGCAGGATAAAGATGAACGAGAAGAGGGGGAAGAAGATGTCCCTCCGATCACTTTCTCAGGGAAGAAAAAGAAGTCATCGAAGTCTTCCAAGAAGGCTGCTAATTCATTTAGTGCAGCTTTTGCCGAAGAAGATGTGGATGAAGAGGTGATTGAAACTTCAAAAAATAGAAAGAAGAAGAATAAAAAGGGCGGAAGAACTGCTCTAGAAGAGGAAGATTTGGACAAGCTTCTTGCTGAGCTTGGGGAGGGGCCTCCGGTAAAGCCTGCTTCCCCTTCAGCAGAGGATGATAAAGTTCAGGCTCCTTCTGAAGTAGCTGCTCCTGCTCCTGCTCCTGCTGTGGTGGAAAAAGAAGGGGAAGGAGAGACAGTGGAGTCAGCTGCTGCAAAAAAGAAGAAGAAGAATAAAAAGAGTGGAAGGACTGCTCAAGAAGAGGAAGATTTGGACAAGCTTCTAGCTGAGCTTGGGGAGGGGCCTGCAGTAAAACCTGCCACCCCTCCAGCTGACGATGATAAAGTTCAGGCTGCTGCTTCTGAAGTAGCTGCACCTGCTTCTGCTGTGGTGGAAAAAGAAGGGGAAGAAGAGACAATGGAGTCAGCAGCAGCAAAAAAGAAGAAAAAGAAAAAAGAAAAGGAAAAGGAGAAGAAGGCTGCTGCAGCCGCAGCTGCTGCAAGTGCCCCCGAAGAAGAAGTTAAACCTGAGGCCTTAGAATCAAAGAAGAATGATTCCAAGACTAAAGCAGCTGACAAGAAAGTGCCAAAGCATGTTAGGGAGATGCAAGAGGCACTGGCCCGAAGAAAAGAGACTGAAGAGAGGAAGAAAAGGGAAGAGGAGGAGAGGCTAAGGAAGGAAGAAGAAGAGCGCCGTAGGCAAGAGGAACTCGAGAGGCAAGCAGAAGAGGCAAGACGTAGGAAAAAGGAAAGGGAGAAGGAGAAGCTCCTGAAGAAGAAGCAAGAAGGAAAATTGTTAAGTGGTAAGCAAAAGGAAGAAGCTCGTCGTCTGGAAGCCATGAGGAAGCAGTTTCTTGCTGGTACAGGGGGTGTCACTCTTCCGGCTGGGGACTCTGGTGCACCAGCCAAACGACCCATATATCGGACAAAGAAGTCGAAACAAACACATCATCATCAGAATGGTACTGCCCCTGATAAGGCAGCTGAAGATGTGGAAGCAAAGGAAAATCTGGAGACCCCTCCTGATGCAGAGTCATTGGAACCTGAGAAGGTTGAAGTGGTTGAATCAGTGCAGGTCGAGGACAAGGATGAAGTTGAAGAAGAAGATGAGGAGGAATGGGATGCAAAGAGTTGGGATGATGTTAATTTAAATGGAAAAAGTGCTTTTGCTGATGAGGAGGCTGACTCTGAACCAGAAACCGTAGTGAAGAAGGAGATAAAAAATGCTGCACCACCAGCTGTTGTCAAGTCAACAGGCACAGCTAAGAAAGCTGCTCCTCAGCCTCCAACTGAGCAAACTGGAAGTAAAAAGCAGGTTGAGAAGCAACGCCTAAATCAGGATCCACAAAATGCAACAGGGCCTTCTCAGCCAAGTGGAGAGAACCTTCGGTCCCCAATTTGCTGTATTATGGGCCATGTGGACACAGGTAAAACCAAGCTCCTTGATTGTATTCGAGGTACAAATGTTCAGGAAGGTGAGGCTGGTGGCATCACGCAACAGATTGGTGCTACGTACTTCCCTGCTGAGAACATACGTGAAAGAACAAAGGAACTAAAAGCTGATGCAAAGCTGAAAGTTCCTGGTCTACTTGTGATAGACACTCCGGGCCATGAGTCTTTTACGAACTTAAGGTCTAGGGGTTCTGGTCTCTGTGATATCGCAATTCTGGTTGTTGATATCATGCATGGATTAGAACCCCAAACAATAGAATCTGTCAACTTATTGAAAATGAGGAACACGGAATTCATAGTGGCATTGAACAAAGTTGACAGACTTTATGGTTGGAAAGTTTGCCGTAATTCTCCAATTGTTAAGGCATTGAAGCAGCAAACCAAGGATGTGCAAAATGAGTTCAATATGAGACTTACTCAGGTTATCACTCAATTCAAGGAACAGGGGTTAAACACTGAGTTGTACTATAAAAATAAAGAAATGGGAGAAACCTTCAGTATTGTACCTACTAGTGCTATAAGTGGTGAAGGTATTCCGGACATGTTATTGTTGTTGGTTCAGTGGACACAAAAAACAATGGCTCAGAAACTTACATATAGTGATGAAGTGCAGTGTACAGTTTTGGAGGTGAAGGTTGTTGAAGGTCATGGGACAACTATTGATGTTGTCTTGGTTAATGGCGTTCTTCATGAAGGAGATCAAATAGTTGTATGTGGAATGCAGGGGCCTATTGTTACTACAATTCGAGCTCTGTTGACACCTCATCCTATGAAGGAGCTCCGTGTTAAGGGCACATATCTCCATCATAAAGAAATTAAGGCTGCTATGGGTATCAAAATCACTGCCCAGGGGCTTGAACATGCTATTGCTGGCACTTCTTTACACGTGGTGGAGCCTGACGATGATTTAGAAAGTGTTAAGGAAGTAGCTATGCAAGATATGAAGCAAGTCATGAGCAGGATTGACAAAAGTGGTGAGGGAGTTTGTGTGCAGGCATCGACCCTTGGTTCTTTGGAAGCATTGCTGGAGTTTTTGAAAACACCAGAAGTGAATATTCCTGTTAGTGGTATAAGCATAGGTCCTGTACATAGAAAAGATGTAATGAAGGCCAGTGTAATGCTTGAAAAGAAAAGAGAGTTTGCCACTATCTTGGCATTTGATGTCAAAGTCAATCAGGAGGCTAAAGATCTTGCGGAAGAACTAGGTGTGAGAATTTTTATGGCTGATATCATTTATCATCTATTTGACCAATTCAAGGCCTATATTGACACCGTTAAGGAGGAAAAGAAGAGAGAAACAGCTGATGAGGCAGTCTTCCCATGTGTGATGAAAATCTTACCTGGTTGCGTTTTCATGAAGAAAGATCCGATTGTTTTGGGAGTTGATATTCTTGAAGGTGTTTTAAAGGTTGGGACTCCAATTTGTATTCCTTCCAGAGATTACATGGACATTGGTCGCATTGCGTCCATTGAAAATAACCGTAAACCTGTTGAGGATGCCAAGAAAGGGCAAAATGTGGCCATTAAGATTGTTGGCACCAATTCGGAGGAACAACAAAAAATGTTCGGGAGGCATTTTGAGATTGATGATGAACTTGTAAGCCGTATCACAAGGAGATCTATCGATGTTCTCAAAGCTAATTATCGGGATGAGCTGACTATGGATGAATGGAGGCTGGTTGCGAAGTTGAAAACCGTTTTCAAGATACAATGA 4023 0.4444 MGRKKPTARDDDNVPTASQGGGKSKKKGLVVDDDEYAELSEEPLAEEEKPVAAGKKKGKKGHSKASKVEEEDLEMAMDNDDDVPEVVFTGKKKGKSKKGGGNSVFTASSFGLLGDEEGGEDDDDDQQSGLTGGVDNDDEEEPVVSFSGKKKSSKGSKKKGGSLFTASAFDAIDEDNEGEEVIDNSMEASREENDDDEPVIAFTGKKKSSKSSKKAGALFTASSFGDTDGEQDKDEREEGEEDVPPITFSGKKKKSSKSSKKAANSFSAAFAEEDVDEEVIETSKNRKKKNKKGGRTALEEEDLDKLLAELGEGPPVKPASPSAEDDKVQAPSEVAAPAPAPAVVEKEGEGETVESAAAKKKKKNKKSGRTAQEEEDLDKLLAELGEGPAVKPATPPADDDKVQAAASEVAAPASAVVEKEGEEETMESAAAKKKKKKKEKEKEKKAAAAAAAASAPEEEVKPEALESKKNDSKTKAADKKVPKHVREMQEALARRKETEERKKREEEERLRKEEEERRRQEELERQAEEARRRKKEREKEKLLKKKQEGKLLSGKQKEEARRLEAMRKQFLAGTGGVTLPAGDSGAPAKRPIYRTKKSKQTHHHQNGTAPDKAAEDVEAKENLETPPDAESLEPEKVEVVESVQVEDKDEVEEEDEEEWDAKSWDDVNLNGKSAFADEEADSEPETVVKKEIKNAAPPAVVKSTGTAKKAAPQPPTEQTGSKKQVEKQRLNQDPQNATGPSQPSGENLRSPICCIMGHVDTGKTKLLDCIRGTNVQEGEAGGITQQIGATYFPAENIRERTKELKADAKLKVPGLLVIDTPGHESFTNLRSRGSGLCDIAILVVDIMHGLEPQTIESVNLLKMRNTEFIVALNKVDRLYGWKVCRNSPIVKALKQQTKDVQNEFNMRLTQVITQFKEQGLNTELYYKNKEMGETFSIVPTSAISGEGIPDMLLLLVQWTQKTMAQKLTYSDEVQCTVLEVKVVEGHGTTIDVVLVNGVLHEGDQIVVCGMQGPIVTTIRALLTPHPMKELRVKGTYLHHKEIKAAMGIKITAQGLEHAIAGTSLHVVEPDDDLESVKEVAMQDMKQVMSRIDKSGEGVCVQASTLGSLEALLEFLKTPEVNIPVSGISIGPVHRKDVMKASVMLEKKREFATILAFDVKVNQEAKDLAEELGVRIFMADIIYHLFDQFKAYIDTVKEEKKRETADEAVFPCVMKILPGCVFMKKDPIVLGVDILEGVLKVGTPICIPSRDYMDIGRIASIENNRKPVEDAKKGQNVAIKIVGTNSEEQQKMFGRHFEIDDELVSRITRRSIDVLKANYRDELTMDEWRLVAKLKTVFKIQ 1340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr18g00155 1340 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 749 1039 IPR027417 -
Accr18g00155 1340 Pfam Elongation factor Tu GTP binding domain 752 960 IPR000795 GO:0003924|GO:0005525
Accr18g00155 1340 MobiDBLite consensus disorder prediction 1 748 - -
Accr18g00155 1340 FunFam Eukaryotic translation initiation factor 5B 742 970 - -
Accr18g00155 1340 Gene3D Translation factors 971 1091 - -
Accr18g00155 1340 PRINTS GTP-binding elongation factor signature 868 877 IPR000795 GO:0003924|GO:0005525
Accr18g00155 1340 PRINTS GTP-binding elongation factor signature 832 843 IPR000795 GO:0003924|GO:0005525
Accr18g00155 1340 PRINTS GTP-binding elongation factor signature 816 826 IPR000795 GO:0003924|GO:0005525
Accr18g00155 1340 PRINTS GTP-binding elongation factor signature 752 765 IPR000795 GO:0003924|GO:0005525
Accr18g00155 1340 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 748 966 IPR000795 GO:0003924|GO:0005525
Accr18g00155 1340 MobiDBLite consensus disorder prediction 459 566 - -
Accr18g00155 1340 MobiDBLite consensus disorder prediction 417 434 - -
Accr18g00155 1340 Pfam Translation-initiation factor 2 1076 1189 IPR023115 -
Accr18g00155 1340 PANTHER TRANSLATION INITIATION FACTOR IF-2-RELATED 475 1336 IPR015760 -
Accr18g00155 1340 MobiDBLite consensus disorder prediction 730 748 - -
Accr18g00155 1340 MobiDBLite consensus disorder prediction 676 690 - -
Accr18g00155 1340 MobiDBLite consensus disorder prediction 293 308 - -
Accr18g00155 1340 Pfam Elongation factor Tu domain 4 1210 1302 IPR029459 -
Accr18g00155 1340 FunFam Eukaryotic translation initiation factor 5B 1090 1196 - -
Accr18g00155 1340 CDD IF2_eIF5B 751 961 - -
Accr18g00155 1340 MobiDBLite consensus disorder prediction 645 662 - -
Accr18g00155 1340 CDD aeIF5B_II 972 1081 - -
Accr18g00155 1340 Pfam Elongation factor Tu domain 2 987 1064 IPR004161 GO:0005525
Accr18g00155 1340 NCBIfam small GTP-binding protein domain 753 877 IPR005225 GO:0005525
Accr18g00155 1340 Gene3D - 743 970 IPR027417 -
Accr18g00155 1340 FunFam Eukaryotic translation initiation factor 5B 1203 1340 - -
Accr18g00155 1340 Gene3D - 1092 1195 IPR036925 -
Accr18g00155 1340 Gene3D Translation factors 1203 1340 - -
Accr18g00155 1340 FunFam eukaryotic translation initiation factor 5B 971 1090 - -
Accr18g00155 1340 Coils Coil 485 547 - -
Accr18g00155 1340 MobiDBLite consensus disorder prediction 367 382 - -
Accr18g00155 1340 CDD IF2_aeIF5B_IV 1211 1306 - -
Accr18g00155 1340 MobiDBLite consensus disorder prediction 604 644 - -
Accr18g00155 1340 SUPERFAMILY Initiation factor IF2/eIF5b, domain 3 1073 1202 IPR036925 -
Accr18g00155 1340 Coils Coil 419 451 - -
Accr18g00155 1340 MobiDBLite consensus disorder prediction 115 141 - -
Accr18g00155 1340 SUPERFAMILY Translation proteins 1207 1339 IPR009000 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr18g00155 195 1340 Eukaryotic Initiation Factors Gene Family AT1G76810 63.621 0.0 1180
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr18g00155 K03243 - gmx:100814640 1461.05