Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr18g00152 ATGGACCCCAAGTTTGTCGGAAAGCCGCCGATGACGGTGGACCTCGAGCAGATGCCTGACACCCCACAGCGTGGGTCCTACCACCGTAGGGCCCACTCCGATACCTCCTTCCGCATCGCCAACTTCGATGAGCTCCTCCTCTTCGACCCTTCCGACCTCGATATCTCCAACCTCCCATCGCCGGCGTTTCCCAACTCCTCCACTGGCGGCAACAACGCCTCGCCTTTCGCCGCAGCACAAAGCAGTGGCGGCGTGCCTGCAGCCTTGGATTTTGTCTCAAAGGCGCCGTCGGAGGAATCTAACGGCGCCGGCGGGAATTCACGGTCCAGGCCGGCTGGTTCCCCTGTCGGTCATACCCGGAGCTTGTCCATGGACTCTGATTTTTTCAACGGCCTGGGATTGACTGGTGGCGTTGATGGCGACAAATTTGGCGGGAAAGGTGCAGAGGAGAGAAGGGTGGGTCATCACCGGCACAGCAATTCCATGGATGGGTCATCGTCGATGTCTTTTGAGGCCGACTCTTCCATGGATATCGACGGCGTGAAGAAGGCCATGGCTCCCAATAAGCTCGCTGAACTTGCTCTTGTTGACCCCAAGAGAGCTAGGAGGATTCTTGCTAATAGGCAATCTGCTGCGCGATCGAAGGAGAGGAAAATTCGGTACACAAATGAACTGGAGAGGAAGGTACAGACGCTTCAAAGTGAAGCAACTAACCTCTCAGCTCAGGTTACTATGCTTCAGAGAGACACTTCAGGGTTGAGCACTGAGAATAAGGAGCTTAAACTTCGCTTAGAGGCTATGGAACAACAAGCACAGCTTAGAGATGCGCTGAATGAAGCATTGAAGGAAGAACTGCAGCGGCTGAAGGTTCAAAGTAGTCAGATAGCTGCCATGAATGGGAACCCTTCATATGGCGGGTTTCTCTCTCAATTTGCTTCCCAGTTAGCATTGCAACATCTTGCTAATCCTCAATCACAGCAGCCTCAACAGCAATCACAGGTCCCTCCCTCTGATCAGCCTTTCAACAGCCAGCCTGGCTCCGACTTCTTGGATTTCAATGGCAAGAACTAG 1071 0.5378 MDPKFVGKPPMTVDLEQMPDTPQRGSYHRRAHSDTSFRIANFDELLLFDPSDLDISNLPSPAFPNSSTGGNNASPFAAAQSSGGVPAALDFVSKAPSEESNGAGGNSRSRPAGSPVGHTRSLSMDSDFFNGLGLTGGVDGDKFGGKGAEERRVGHHRHSNSMDGSSSMSFEADSSMDIDGVKKAMAPNKLAELALVDPKRARRILANRQSAARSKERKIRYTNELERKVQTLQSEATNLSAQVTMLQRDTSGLSTENKELKLRLEAMEQQAQLRDALNEALKEELQRLKVQSSQIAAMNGNPSYGGFLSQFASQLALQHLANPQSQQPQQQSQVPPSDQPFNSQPGSDFLDFNGKN 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr18g00152 356 Pfam bZIP transcription factor 199 257 IPR004827 GO:0003700|GO:0006355
Accr18g00152 356 MobiDBLite consensus disorder prediction 1 32 - -
Accr18g00152 356 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 21 339 - -
Accr18g00152 356 MobiDBLite consensus disorder prediction 320 356 - -
Accr18g00152 356 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 197 260 IPR004827 GO:0003700|GO:0006355
Accr18g00152 356 MobiDBLite consensus disorder prediction 58 79 - -
Accr18g00152 356 Coils Coil 222 298 - -
Accr18g00152 356 MobiDBLite consensus disorder prediction 139 171 - -
Accr18g00152 356 MobiDBLite consensus disorder prediction 95 122 - -
Accr18g00152 356 MobiDBLite consensus disorder prediction 56 81 - -
Accr18g00152 356 CDD bZIP_plant_RF2 200 249 IPR044759 GO:0003700|GO:0006355
Accr18g00152 356 Gene3D - 198 251 - -
Accr18g00152 356 SMART brlzneu 195 259 IPR004827 GO:0003700|GO:0006355
Accr18g00152 356 FunFam Transcription factor VIP1 198 251 - -
Accr18g00152 356 MobiDBLite consensus disorder prediction 320 350 - -
Accr18g00152 356 SUPERFAMILY Leucine zipper domain 199 250 IPR046347 GO:0003700|GO:0006355
Accr18g00152 356 MobiDBLite consensus disorder prediction 99 122 - -
Accr18g00152 356 MobiDBLite consensus disorder prediction 143 159 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr18g00152 9 327 bZIP Transcription Factor Family AT1G43700 50.893 3.92e-80 246
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Accr18g00152 bZIP_1 2.5e-07 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr18g00152 K20557 - qsa:O6P43_004198 377.096