Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr18g00130 ATGGAGCGAGTGATGTCAGGGTATGGCGGCGGCGCCGGAGAGTTGTCGGCTATGGTTTCGGCGCTGACGCATGTGGTGTCGTCAGGTTCTTCTGGACACAACAGACACACTAATAATGCATGGCTCCAAGGAGTGAGCGGTTTTCCTATGATGTCATCATCACCTCGTTTGTCTCCTTCTTCATCTTCGTCAGGTCCTTTCATGGCGTCTGCCTCTGGTTCATGGGTAGGTCAGAAAAGAGGGCGTCAACAAGAAGAAGATGAAGCCGCATACAAAGCCGCCATTAATGACTCAACTGCACCATTATTACAGAACGAGTCATCTTCAGCAGTGACGGAGGCGGAAGATGCGTCAACGGTGACTACCGTTGCGTTACCGGTGATGCCGTCGTCTGGTGAAACTGGTGGCTCGTATGAGGAAACAGGGGAGAGGAGGAGGAGATACAGAGGAGTGAGGCAGAGACCGTGGGGTAAGTGGGCAGCGGAGATTCGCGACCCTCACAAGGCGGCGAGGGTATGGCTTGGCACGTTCGACACCGCGGAGGCAGCAGCCAGAGCTTATGATGAAGCAGCATTGAGGTTCAGAGGTAGCAGAGCCAAACTAAACTTTCCAGAAAACGTCAGGGCAGTTCCAGGGCCAGTTCAGAATTTTCCGGTCACCAGCTACGTCTTTCAGCCGTCCTCTACGGCTACGTTTCCGTTCATGCAGGCGTCTTCTTTTCAGGGGCCATCTGATTTGGTCAGGGACTATTGGAATTACACCCAGCTGTTACAAAGCTCCGGCGACTTCCATGGTCAACAGCAGCCACAGCCGCCGCAACAGATACCACCGAGTTTGATGCAGCAATGGCTCTATAATTCTCAAATGAGTGCTCTTCGGCCATCGTCTTCAATGTCATTGTTATCGCCGGCGTCATTGTCGTCTTCTTCCACTCCCACTGCATTTTCTCCCTCTAGTGAGTTATCCTCTGCTTCATTTCCCCTGCCTTCAGGTCAACAAATAGGCTATTTCCAACCACCAATGGGAAATCAAACTCACGCCGGAGAAAACTCATATTTTCCGACGACAACATGGTCAGACACGGGTAACTTTCCTCCGCCGCCTAGGTGA 1110 0.5234 MERVMSGYGGGAGELSAMVSALTHVVSSGSSGHNRHTNNAWLQGVSGFPMMSSSPRLSPSSSSSGPFMASASGSWVGQKRGRQQEEDEAAYKAAINDSTAPLLQNESSSAVTEAEDASTVTTVALPVMPSSGETGGSYEETGERRRRYRGVRQRPWGKWAAEIRDPHKAARVWLGTFDTAEAAARAYDEAALRFRGSRAKLNFPENVRAVPGPVQNFPVTSYVFQPSSTATFPFMQASSFQGPSDLVRDYWNYTQLLQSSGDFHGQQQPQPPQQIPPSLMQQWLYNSQMSALRPSSSMSLLSPASLSSSSTPTAFSPSSELSSASFPLPSGQQIGYFQPPMGNQTHAGENSYFPTTTWSDTGNFPPPPR 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr18g00130 369 ProSiteProfiles AP2/ERF domain profile. 147 204 IPR001471 GO:0003700|GO:0006355
Accr18g00130 369 PRINTS Ethylene responsive element binding protein signature 170 186 IPR001471 GO:0003700|GO:0006355
Accr18g00130 369 PRINTS Ethylene responsive element binding protein signature 148 159 IPR001471 GO:0003700|GO:0006355
Accr18g00130 369 Gene3D AP2/ERF domain 146 206 IPR036955 GO:0003700|GO:0006355
Accr18g00130 369 Pfam AP2 domain 147 196 IPR001471 GO:0003700|GO:0006355
Accr18g00130 369 MobiDBLite consensus disorder prediction 102 121 - -
Accr18g00130 369 MobiDBLite consensus disorder prediction 309 360 - -
Accr18g00130 369 SMART rav1_2 147 210 IPR001471 GO:0003700|GO:0006355
Accr18g00130 369 SUPERFAMILY DNA-binding domain 147 205 IPR016177 GO:0003677
Accr18g00130 369 MobiDBLite consensus disorder prediction 127 146 - -
Accr18g00130 369 FunFam Ethylene-responsive transcription factor 2 146 205 - -
Accr18g00130 369 PANTHER DNA-BINDING DOMAIN 98 294 IPR044808 GO:0003700|GO:0009873
Accr18g00130 369 MobiDBLite consensus disorder prediction 309 369 - -
Accr18g00130 369 MobiDBLite consensus disorder prediction 51 89 - -
Accr18g00130 369 CDD AP2 155 206 IPR001471 GO:0003700|GO:0006355
Accr18g00130 369 MobiDBLite consensus disorder prediction 51 79 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr18g00130 107 222 AP2-EREBP Transcription Factor Family AT2G33710 54.167 5.88e-36 129
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Accr18g00130 AP2 7.2e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr18g00130 - - pcin:129292679 397.127