Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr18g00127 ATGGATACTCATGCTGAAGAGTTTCCTCAATACATACATATAACGCAGAATGAATTCTTCACTAGAAGGCACGTGAAGCAGAAGGAGGAGGATATTGCTATATGTGAATGCAAATATGATGATATTGACCCTGATAGTGCATGTGGGGATGGGTGTCTCAACGTATTGACCAACTCTGAATGCACCCCTGGCTATTGCCCTTGTGATGTCTTTTGCAAAAATCAGAGATTTCAGAAGTGTGAATATGCAAAAACAAAGTTGTTCAAAACTGAAGGCCGTGGATGGGGTCTTTTGGCTGATGAGAATATTAAGGCAGGCCAATTTATCATTGAATACTGTGGAGAAGTAATTTCATGGAAAGAAGCCAAGCGAAGAGCCCAGGCTTATGAAACTCAAGGTCTTAAGGATGTATTCATTATTTATCTTAATGCCTCTGAATCAATTGATGCAACTAGAAAGGGAAGCCTTGGTAGATTTATAAACCATTCATGTCAGCCAAATTGTGAGACAAGGAAATGGAATGTTCTGGGTGAGATAAGAGTTGGAATATTTGCAAAACAAGATATACCTGTTGGAGATGAACTGGCGTATGATTATAATTTTGAATGGTTTGGTGGTGCAAAGGTTCGTTGCCTCTGTGGTGCAGCCAAATGTTCTGGATTCCTTGGAGCGAAATCTCGTGGTTTTCAGGCAAATACATACTTATGGGAAGATGATGATGAAAGGTACACTGTCGAGAAAATTCCAGTATATGACTCTGCAGAGGATGAACCTCCCTCAAAGGTCCTCAGAAACTTATATTCTGACATTCCCGGTATGCAAGTTAATGGGAAAACGGAACACTCCATGGACGTTATCATAAAACCTGAACAATTATCAGAGTCAACTGCTTTTGGCATTCAACCGGTTGGATCAGTTTCAGAAAAGGGTTTACATATCAATTCAATAAAATCTGAAATGGAAAGTGATGATATGAAGGCCTTTCCACAAAACAATGCAATGATATCACGAATCAGAAGTAACACTGCGGCCCGAAACTATCACATTGGACCTAGGTCCATACCTGCCAAAAAATCAAAGAAATATAATGAAAGGTTCAAAAAGATCACACAGAAGCAAGTCGATGTGAAGGCAGCTGCTGAATCTTTAGCATCAAAAGAAGCACAAGAGGAGATTTTGAGATATGAGGAAATGAAGAATGAGGCGACTTGTGGTCTTGATAACTTGTACAATGAGATTCGACCAGCCATTGAAGAACATGAGAGGGATAGCCAAGACAGTGTATCGACGAGTGTAGCAGAGAAGTGGATTGAAGCTAGCTGTTTGAAATTGAAGGCAGAGTTTGACCTTTACTCTTCCATTGTCCAAAATTTTGCCTGCACTCCTCTGAAGCCTCGTGTCCCTGCAAAACCTTCTCCTTCTGCTCAAGTTGATCATGAAAATAAGTTGTTGACGAATTGA 1461 0.4025 MDTHAEEFPQYIHITQNEFFTRRHVKQKEEDIAICECKYDDIDPDSACGDGCLNVLTNSECTPGYCPCDVFCKNQRFQKCEYAKTKLFKTEGRGWGLLADENIKAGQFIIEYCGEVISWKEAKRRAQAYETQGLKDVFIIYLNASESIDATRKGSLGRFINHSCQPNCETRKWNVLGEIRVGIFAKQDIPVGDELAYDYNFEWFGGAKVRCLCGAAKCSGFLGAKSRGFQANTYLWEDDDERYTVEKIPVYDSAEDEPPSKVLRNLYSDIPGMQVNGKTEHSMDVIIKPEQLSESTAFGIQPVGSVSEKGLHINSIKSEMESDDMKAFPQNNAMISRIRSNTAARNYHIGPRSIPAKKSKKYNERFKKITQKQVDVKAAAESLASKEAQEEILRYEEMKNEATCGLDNLYNEIRPAIEEHERDSQDSVSTSVAEKWIEASCLKLKAEFDLYSSIVQNFACTPLKPRVPAKPSPSAQVDHENKLLTN 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr18g00127 486 Pfam SET domain 94 200 IPR001214 GO:0005515
Accr18g00127 486 PANTHER SET DOMAIN PROTEINS 7 441 - -
Accr18g00127 486 SUPERFAMILY SET domain 9 220 IPR046341 -
Accr18g00127 486 Gene3D SET domain 1 235 IPR046341 -
Accr18g00127 486 SMART PostSET_3 207 223 IPR003616 -
Accr18g00127 486 ProSiteProfiles SET domain profile. 83 200 IPR001214 GO:0005515
Accr18g00127 486 MobiDBLite consensus disorder prediction 465 486 - -
Accr18g00127 486 Pfam AWS domain 43 80 IPR006560 GO:0005634|GO:0042054
Accr18g00127 486 ProSiteProfiles AWS domain profile. 30 81 IPR006560 GO:0005634|GO:0042054
Accr18g00127 486 ProSiteProfiles Post-SET domain profile. 207 223 IPR003616 -
Accr18g00127 486 SMART set_7 83 206 IPR001214 GO:0005515
Accr18g00127 486 SMART shorttest3 30 82 IPR006560 GO:0005634|GO:0042054
Accr18g00127 486 FunFam Histone-lysine N-methyltransferase 1 235 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr18g00127 65 222 C2H2 Transcription Factor Family AT2G23740 33.708 5.77e-22 98.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Accr18g00127 SET 2e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr18g00127 - - lang:109335575 730.324