Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr18g00107 ATGGTAGGATCGGAGACAGGGACACCGACGGCGGCATCGGCACCGGCGACGCCGGGAACTCCGGCGCCGCTGTTCACGTCGCTGCATGTGGACTCTGTATCATACGAGAGGAACTCAATGCCGAGGTGTAAGTGTTTGCCAACGAAGAGGGACACCTGCTTCACCGATCTCTCTGTCCCTACTCCTGACGTGTCCCTCACCCGCAAGATCGGAGCAGAGTTCGTAGGCACGTTCTTACTGATGTTCGCGGCATCGGCGGGGCCCATCCTGAACCAGAAATACACCGGAGCAGAGAGCCTGCTGGGCAATGCAGCTTGTGCCGGCTTAGCCGTGATGATCATCATCTTGTCCACCGGCCATATTTCCGGCGCCCACCTCAACCCTTCCCTCACCATCGCCTTCGCCACCTTCCGACACTTCCCGTGGGCCCACGTCCCCGCCTACATTGCCGCTCAGGTCTCCGCCTCCATCTGCGCCTCCTTCGCCCTCAAGGCCATCTTCCATCCCTACATGTCCGGCGGCGTCACCATTCCTTCAGAGACTACCACCGTTGGCCAGGCTTTCGCGCTTGAGTTCATAATCACTTTCAATCTCCTCTTCGTCGTCACTGCTGTTGCCACTGATACTCGTGCTGTCGGGGAATTGGCTGGAATTGCTGTTGGAGCCACAGTTTTGCTCAACATTCTCATTTCAGGGCCGGCAAGTGGTGGTTCAATGAACCCGGTTCGCACACTGGGTCCAGCTGTGGCAGCAAGAAATTACATGCACGTATGGATATATCTGATTGCGCCCACCCTCGGAGCTCTGGCCGGTGCCGGTGTTTATACTCTCGTCAAGCTCCGCGACCACGAGGCTGAGCCACCACGCCAGGTTCGGAGCTTCCGTCGCTAG 891 0.5847 MVGSETGTPTAASAPATPGTPAPLFTSLHVDSVSYERNSMPRCKCLPTKRDTCFTDLSVPTPDVSLTRKIGAEFVGTFLLMFAASAGPILNQKYTGAESLLGNAACAGLAVMIIILSTGHISGAHLNPSLTIAFATFRHFPWAHVPAYIAAQVSASICASFALKAIFHPYMSGGVTIPSETTTVGQAFALEFIITFNLLFVVTAVATDTRAVGELAGIAVGATVLLNILISGPASGGSMNPVRTLGPAVAARNYMHVWIYLIAPTLGALAGAGVYTLVKLRDHEAEPPRQVRSFRR 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr18g00107 296 Gene3D Glycerol uptake facilitator protein. 56 291 IPR023271 -
Accr18g00107 296 ProSitePatterns MIP family signature. 125 133 IPR022357 -
Accr18g00107 296 PANTHER AQUAPORIN NIP2-1 51 284 IPR034294 -
Accr18g00107 296 SUPERFAMILY Aquaporin-like 64 289 IPR023271 -
Accr18g00107 296 CDD MIP 68 278 IPR000425 GO:0015267|GO:0016020|GO:0055085
Accr18g00107 296 PRINTS Major intrinsic protein family signature 221 243 IPR000425 GO:0015267|GO:0016020|GO:0055085
Accr18g00107 296 PRINTS Major intrinsic protein family signature 258 278 IPR000425 GO:0015267|GO:0016020|GO:0055085
Accr18g00107 296 PRINTS Major intrinsic protein family signature 144 163 IPR000425 GO:0015267|GO:0016020|GO:0055085
Accr18g00107 296 PRINTS Major intrinsic protein family signature 107 131 IPR000425 GO:0015267|GO:0016020|GO:0055085
Accr18g00107 296 PRINTS Major intrinsic protein family signature 190 208 IPR000425 GO:0015267|GO:0016020|GO:0055085
Accr18g00107 296 PRINTS Major intrinsic protein family signature 68 87 IPR000425 GO:0015267|GO:0016020|GO:0055085
Accr18g00107 296 Pfam Major intrinsic protein 64 275 IPR000425 GO:0015267|GO:0016020|GO:0055085
Accr18g00107 296 FunFam Aquaporin NIP2-1 56 290 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr18g00107 24 296 Major Intrinsic Protein MIP AT4G10380 76.429 1.94e-153 429
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr18g00107 K09874 - cave:132186412 456.447