Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr18g00087 ATGGATATCAGCAATGATTCTATATCAAGTAAGCATCGCAAGCCTCATGATTCATTATCTGTTTCTCCATCACAAACTTCTCCAAAGTCACCCAAACCCTCTGGCTCTCCAAGGTCCCCTAGGTTCCAAGTCAAGCACCCACAATCTCCAAGAGATGGATGTCCCAAAAAAGATTCTTTCCCTGTTACTTCATTGAAAATTTCTCCGAAGTCACCAGCGTCCCCCACTTCTCCAAGGTCTCCAAATTCCCCAAGGTTACCTGGCCATAGTACAAAGAATGAAAGGCAATCACGTTCGCCAAGAGATGGACGACCAAAGAAAGGAGGTTGCGGAGGGAAAGGCACGTGGGGAGGATTGCTTGATACGGAAGACATGGACTTTCTTGACCCTCATGATCCGAACTATGACAGCACTGAGGAAAAAGAACCTCCAACTGAAAACAAAAAGAAAGGGGAGTTAGAAGAGTACAAGAGGAAAGCTATAATAATAGTGGAGGAATATTTTACCACTGATGATATTTTTGCTGTGAAAAATGAACTGAAGTTACTTGGGGCACCATACTTCAGCTACTATTTTATCAAAAAGCTTGTCTCAGTGTCAATGGACAGACATGACAAAGAAAAAGAAATGGCTGCTGTTTTGCTATCTGCACTATATGCCGACACATTTGATCCTTCTCAAGTTTACAAGGGCTTCAGCAAACTAGTTGAATCTGCGGATGACCTGATTGTGGACATACCTGACGCGGTTGATGTTCTAGCGCTTTTCTTGGCTCGAGCCGTGGTTGATGACATACTTCCTCCTGCATTTTTGAAGAGACAGATGGCTTACTTACCGAAGGACTCGAAAGGGGTTGAGGTCTTGAAGAAGGCGGAGAAAAACTACCTCTCAGCCCCTCTACATGCTGAAATTATAGAGCGCCGGTGGGGAGGAAGTAAGAACATGACAGTTGATGATGTCAAGGCTAGAATAAACAATTTATTGGTAGAATACGTAACAAGTGGTGACAAGAAAGAAGCTTTTAGATGCATTAAGGATTTGAAAGTTCCATTCTATCACCATGAGATAGTGAAAAGGGCTCTAATAATGGCAATGGAGAGGCGCCAAGCAGAAGGTCCTCTGCTAGATCTCTTGAAAGAAGCAGGTGAAGAAGGCTTCATCAACTCCAGCCAAACCTCAAAGGGCTTTGATCGGTTGATTGACACGGTTGATGACTTATCACTCGACATACCAAACGCGCGTGAAATACTCCAAAATTTAATGTCCAAGGCAGCATCTGATGGTTGGATATGTGTTTCATCTTTAAAATCACTCTCACTGGAGCCGAAAAAGGAGTCACTAGAAGAAAGTGCAGCCAGAAATTTCAAGGTAAAGGCTCAATCCATAATTCAAGAGTACTTCTTGTCAGGTGACATATTTGAAGTTATTAGTTGTCTTGAGCAAGAGAACAAAACTTGCTCTCCACACCTCAATGCAATATTTGTCAAGAGGCTTATAACTTTAGCCATGGACCGAAAGAAGCGCGAGAAGGAAATGGCCTCGGTTCTGCTTTCATCTCTGTGTTTCCCAGCTGATGATGTAGTGAATGGTTTTGTCATGTTGATAGAATCAGCAGATGACACTGCCCTCGACAATCCAGTGGTAGTGGAGGATCTTGCCATGTTCCTGGCCAGAGCAGTAGTGGATGAAGTCATGGCCCCACAACATCTAGAAGAGATTGGAACACAATGTGTGGGACCAGATTCAATAGGAAGTAAAGTGCTTCAAATGGCAAAGTCATTGCTCAAAGCTAGGCTTTCAGGGGAGAGAATATTAAGGTGTTGGGGTGGAGGAGGAAGCAGCAAAAGCGGGTGGGAAATTGAGGATGTTAAGGGCAAGATTATAAATCTTTTGGAGGAGTATGAATCCGGGGGCGACATAAGGGAGGCGTGTCGGTGCATGAAAGAACTTGGTATGCCATTTTTCCACCATGAGGTTGTGAAGAAAGCTCTGGTGAAAATTATTGAGAAGAAGAATGATAGGTTGTGGGGTCTACTCAAGGAATGTTTTGAATCTGGACTGATAACAATGAACCAGATGATGAAGGGGTTTGGAAGGCTTGCAGAATCTCTTGATGACTTGGCTTTGGATGTTCCTGATGCCAAGAAACAGTTTATACACTATGTAGAACTAGCAAAGGGTTCAGAGTGGTTGGATTCTTCATTTAGTCTCAGCAAATTTGAACATTCCACAGAGAATGGAACCTGCTAA 2250 0.4333 MDISNDSISSKHRKPHDSLSVSPSQTSPKSPKPSGSPRSPRFQVKHPQSPRDGCPKKDSFPVTSLKISPKSPASPTSPRSPNSPRLPGHSTKNERQSRSPRDGRPKKGGCGGKGTWGGLLDTEDMDFLDPHDPNYDSTEEKEPPTENKKKGELEEYKRKAIIIVEEYFTTDDIFAVKNELKLLGAPYFSYYFIKKLVSVSMDRHDKEKEMAAVLLSALYADTFDPSQVYKGFSKLVESADDLIVDIPDAVDVLALFLARAVVDDILPPAFLKRQMAYLPKDSKGVEVLKKAEKNYLSAPLHAEIIERRWGGSKNMTVDDVKARINNLLVEYVTSGDKKEAFRCIKDLKVPFYHHEIVKRALIMAMERRQAEGPLLDLLKEAGEEGFINSSQTSKGFDRLIDTVDDLSLDIPNAREILQNLMSKAASDGWICVSSLKSLSLEPKKESLEESAARNFKVKAQSIIQEYFLSGDIFEVISCLEQENKTCSPHLNAIFVKRLITLAMDRKKREKEMASVLLSSLCFPADDVVNGFVMLIESADDTALDNPVVVEDLAMFLARAVVDEVMAPQHLEEIGTQCVGPDSIGSKVLQMAKSLLKARLSGERILRCWGGGGSSKSGWEIEDVKGKIINLLEEYESGGDIREACRCMKELGMPFFHHEVVKKALVKIIEKKNDRLWGLLKECFESGLITMNQMMKGFGRLAESLDDLALDVPDAKKQFIHYVELAKGSEWLDSSFSLSKFEHSTENGTC 749
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr18g00087 749 ProSiteProfiles MI domain profile. 155 276 IPR003891 -
Accr18g00087 749 SUPERFAMILY ARM repeat 619 736 IPR016024 -
Accr18g00087 749 SUPERFAMILY ARM repeat 152 313 IPR016024 -
Accr18g00087 749 SUPERFAMILY ARM repeat 452 613 IPR016024 -
Accr18g00087 749 FunFam programmed cell death protein 4 145 298 - -
Accr18g00087 749 Gene3D - 441 598 - -
Accr18g00087 749 Gene3D - 144 296 - -
Accr18g00087 749 SMART ma3_7 156 267 IPR003891 -
Accr18g00087 749 SMART ma3_7 455 566 IPR003891 -
Accr18g00087 749 SMART ma3_7 623 732 IPR003891 -
Accr18g00087 749 SMART ma3_7 320 431 IPR003891 -
Accr18g00087 749 MobiDBLite consensus disorder prediction 124 152 - -
Accr18g00087 749 Pfam MA3 domain 321 430 IPR003891 -
Accr18g00087 749 Pfam MA3 domain 157 267 IPR003891 -
Accr18g00087 749 Pfam MA3 domain 624 731 IPR003891 -
Accr18g00087 749 Pfam MA3 domain 456 565 IPR003891 -
Accr18g00087 749 MobiDBLite consensus disorder prediction 91 108 - -
Accr18g00087 749 MobiDBLite consensus disorder prediction 1 152 - -
Accr18g00087 749 ProSiteProfiles MI domain profile. 319 440 IPR003891 -
Accr18g00087 749 FunFam programmed cell death protein 4 444 599 - -
Accr18g00087 749 PANTHER PROGRAMMED CELL DEATH 4 68 735 IPR039778 GO:0045892
Accr18g00087 749 Gene3D - 606 738 - -
Accr18g00087 749 Gene3D - 306 438 - -
Accr18g00087 749 MobiDBLite consensus disorder prediction 1 18 - -
Accr18g00087 749 ProSiteProfiles MI domain profile. 622 741 IPR003891 -
Accr18g00087 749 SUPERFAMILY ARM repeat 315 436 IPR016024 -
Accr18g00087 749 ProSiteProfiles MI domain profile. 454 575 IPR003891 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr18g00087 626 718 Eukaryotic Initiation Factors Gene Family AT4G30680 31.250 2.90e-06 47.8