Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr18g00081 ATGGGTTTGGAATCAGACTCCGAGTGTTTCAGCAAAATGATGACTTCGATGCCTGGGTTTCGCTTCCACCCTACGGACGAGGAACTGGTCATGTATTATCTGAAGAGGAAGATGTCTGGGAAGAAGCTGAAGCTCGACGTGATCCGGGAGACTGACGTCTGCAAGTGGGACCCTGAGGAATTGCCTGCGCAATCTGGGCTAAAAACTGGAGATAGACAATGGTTTTATTTCAGTCCTAGAGATAGGAGGTACCCTAATGCTGCAAGATCAAGCAGAGCAACAAGACATGGGTACTGGAAAGCTACAGGAAAAGATCGTAATGTGACTTACAATTCCCGAACCGTTGGAGTTAAGAAGACACTGGTTTTCTATAAAGGCAGAGCTCCTAATGGTGAGCGCACTGATTGGGTTATGCATGAGTACACCTTGGATGAACAAGAGCTTCAAAGATGCCAAGGCATCAAGGACTATTTTGCACTCTACAAGCTTTACAAGAAAAGTGGTCCTGGTCCTAAAAATGGTGAGCAGTATGGTGCACCATTTAATGAGGAAGAGTGGGCAGATGATGATTTTGTAGATTGCAATGTCAAGTCAGCTGACTGTGAATTTCCAACACAGCAACATGATGTTGTCCCTTGTTTTGATTCTTCCAATGTGAATGGTCCTGCGCAGCCATTGCTTGATGATGAAATTGAGGAGTTCATGAAGAAACTTATGGATGATGAGTCTCTCCTTGAACAGCAAAATGTGAACAATAATTCTGCCTTACCTTTGATATGTGAGGAAATGCAGAACGGCATGGTTGATCAATTCTTTAGGGAACTCATGTTTCCTGAGCCACTTGAAGTGTCTCACTCGAGTGGTGTTCAGAAATGTGGAGTGGGTCCCAGTTCTGACTTCCCTCAGTCAGCTATTTCTTACCTGCAAATGTCTGAAGCTCCCGAGGTTACTTCTACTCCCAACACTAAAGGAGCTGAAACTGGCTTATGTGTGGATGACTTCTTGGAATTGGATGATCTCATCGGTCCAGAACTTGCATTGCCAAACATCGATAAGCCTGTAGAGAACCTGCAGTTTGAAGATGGATTGAGTGAATTTGATCCGTACCTTGATCCTCAGATATTTCTTCTTGACATGGAGCCGGTATCACATCCATATATGAACACAATGGATGGTGCTACTGTAGATCAAAATTATGAGCTGCTGTCAAATCAAGAAAATCCAAATCAAATTGGTGAAGTCGTGATGCATGCTCAAAGAAACATCCTGCATTCAGCAGAACACATCAATGTTTCTACGTCTCTGCCAACATCAGGTATATATATTGAGTCTGCTAGCTTTCCTACTGAAAGCAATGGAACTCAACAAAGCACTGTGGGAGGTGTTGCTGCAAGTAAATTATCTTCTTCTCTCTGGAACTTTGTTGAGTCAATACCGACCACTCCTGCATCAGCATCTGAAAATGCTTTGGTAAATCGGGCCTTCGAGCAGTTGTCTGGCTTCAATGGGTTGAATATCGGCGTGAAGGACACAAGCGTTGCTGCAGGTAATGACACTGCAACTATGAAGAGAGCAGGCAAAAAAGGGGTTATCTTCCTTTTCTTTCCAGTTCTTGTTGCCTTGTGTGCTTTCTTATGGGTTTCTTTGGGAACTTTTAGACTATTAGGTGTACCTAACTTGTGA 1683 0.4361 MGLESDSECFSKMMTSMPGFRFHPTDEELVMYYLKRKMSGKKLKLDVIRETDVCKWDPEELPAQSGLKTGDRQWFYFSPRDRRYPNAARSSRATRHGYWKATGKDRNVTYNSRTVGVKKTLVFYKGRAPNGERTDWVMHEYTLDEQELQRCQGIKDYFALYKLYKKSGPGPKNGEQYGAPFNEEEWADDDFVDCNVKSADCEFPTQQHDVVPCFDSSNVNGPAQPLLDDEIEEFMKKLMDDESLLEQQNVNNNSALPLICEEMQNGMVDQFFRELMFPEPLEVSHSSGVQKCGVGPSSDFPQSAISYLQMSEAPEVTSTPNTKGAETGLCVDDFLELDDLIGPELALPNIDKPVENLQFEDGLSEFDPYLDPQIFLLDMEPVSHPYMNTMDGATVDQNYELLSNQENPNQIGEVVMHAQRNILHSAEHINVSTSLPTSGIYIESASFPTESNGTQQSTVGGVAASKLSSSLWNFVESIPTTPASASENALVNRAFEQLSGFNGLNIGVKDTSVAAGNDTATMKRAGKKGVIFLFFPVLVALCAFLWVSLGTFRLLGVPNL 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr18g00081 560 Pfam No apical meristem (NAM) protein 18 143 IPR003441 GO:0003677|GO:0006355
Accr18g00081 560 Gene3D NAC domain 25 169 IPR036093 GO:0003677|GO:0006355
Accr18g00081 560 SUPERFAMILY NAC domain 12 166 IPR036093 GO:0003677|GO:0006355
Accr18g00081 560 FunFam NAC domain-containing protein 100-like 25 170 - -
Accr18g00081 560 ProSiteProfiles NAC domain profile. 16 166 IPR003441 GO:0003677|GO:0006355
Accr18g00081 560 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 15 241 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr18g00081 1 556 NAC Transcription Factor Family AT1G34190 40.672 3.99e-125 377
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Accr18g00081 NAM 5.9e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr18g00081 - - gmx:100794925 647.506