Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr18g00054 ATGGATCCCTCCCAGCTTCCTCCTCCTCCTCCCACCACCAACGACAATGCTAAGCCTTCCTCTCTCCAACTCGAGGCCGCTACCTCCCTTAAGCCCAGTCCCTTACGTAAGATCATCGCCGTCGCCTCCATCGCTGCCGGCCTTCAGTTCAGCTGGGCTCTCCAGCTTTCTCTCTTGGCCCCTTACGTCCAACTCCTCGGCATCCCCCACACCTGGGCCGCCTTCATCTGGCTCTGCGGCCCCATTTCTGGCATGATCATCCAACCCATAGTTGGCTACTACAGCGACCGTTGCACTTCGCGATTCGGACGCCGCAGTCCTTTCATTGCCGCCGGCGCTCTCTCCATTGCAGTCGGCATCTTCCTCATTGGCTGTGCTGCTGACATGGGCCACATGTTTGGTGACTCCTTGGAGAACAAAAGCCGCCCTCGCGCTATCGTCATACTCATCATCGGCTTCTGGATCTTCGATGTTGCCAACAACATGCTGCAGGGGCCGTGCAGGGCACTTCTGGCTGACCTCGCCGCCGGCGACCAGCATCATACCACAACTGCGAACTCGTTCTTTTCGTTCTTCATGGCAGTCGGAAACGTGCTCGGCTATGCCGCTGGATCGCTCAGTCGCCTCCACAAGATGTTCCCGTTCACTATGACCAAAGCCTGCGACGTGAACTGCGCGAATCTCAAGAGCTGCTTCTTCCTCTCCATGGCACTTCGGTCAACTGTCTCCATGATTGCGCTGACATACGTGAAGGAGCAAAAGCCGTCGTCGGGTGATAAACCGACGAAAGAAGCGGGTGGTAACGAAGAGGCATTAGAAGAAGAATCAGGACCGTCACGAGAAATGCCTTGCTTTGGAGAAATATGGGGTGCTTTCCGAGTGATGAAGAAGCCGATGTGGATCTTGCTTTTGGTGACGTGTCTCAACTGGATTGCTTGGTTCCCCTTCCTGCTGTTCGACACTGATTGGATGGGGAAGGAGGTGTATGGCGGGAAGGTGGGAGAAGGGAGGGTGTACGATATGGGGGTCCGCGCTGGCGCATTGGGGCTCATGCTCAACTCAGTGGTTCTGGGAGTCACGTCCTTGAGCATCGAGGCTCTGGCGCGTGGGGTTGGCGGCGTCAAGCGGCTCTGGGGAATCGTCAACTTCCTGCTCGCCACCTGTTTAGCACTCACCGTGCTCATTACAAAAATAGCCGAACACACACGGCGCTACACCGGAAACTTCGAGCCTCTTCCGCCATCCGCCGGGGTGAAAGGTGGTGCGTTGGCTCTTTTCGCGGTGCTAGGTATCCCCCTTGCGATTACTTTCAGTATTCCTTTTGCTCTTGCATCTATATTCTCCAACAGTTCAGGGGCAGGCCAAGGATTATCTTTGGGAGTTCTTAATCTTTCAATAGTCATTCCACAGATGGTGATTTCTGTGGCAAGTGGACCTTGGGATGCTTTGTTTGGCGGCGGCAACTTGCCAGCGTTTGTGGTAGGCGCAGTGGCTGCGGCGATAAGTGGCTTGTTATCGATATTCCTACTGCCATCTCCACCAGTACCGGATATGGCCAATTCTGTGGCGGCCGGAGGCTTCCATTAA 1587 0.5545 MDPSQLPPPPPTTNDNAKPSSLQLEAATSLKPSPLRKIIAVASIAAGLQFSWALQLSLLAPYVQLLGIPHTWAAFIWLCGPISGMIIQPIVGYYSDRCTSRFGRRSPFIAAGALSIAVGIFLIGCAADMGHMFGDSLENKSRPRAIVILIIGFWIFDVANNMLQGPCRALLADLAAGDQHHTTTANSFFSFFMAVGNVLGYAAGSLSRLHKMFPFTMTKACDVNCANLKSCFFLSMALRSTVSMIALTYVKEQKPSSGDKPTKEAGGNEEALEEESGPSREMPCFGEIWGAFRVMKKPMWILLLVTCLNWIAWFPFLLFDTDWMGKEVYGGKVGEGRVYDMGVRAGALGLMLNSVVLGVTSLSIEALARGVGGVKRLWGIVNFLLATCLALTVLITKIAEHTRRYTGNFEPLPPSAGVKGGALALFAVLGIPLAITFSIPFALASIFSNSSGAGQGLSLGVLNLSIVIPQMVISVASGPWDALFGGGNLPAFVVGAVAAAISGLLSIFLLPSPPVPDMANSVAAGGFH 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr18g00054 528 MobiDBLite consensus disorder prediction 256 277 - -
Accr18g00054 528 SUPERFAMILY MFS general substrate transporter 36 513 IPR036259 -
Accr18g00054 528 MobiDBLite consensus disorder prediction 254 280 - -
Accr18g00054 528 CDD MFS_SLC45_SUC 38 508 - -
Accr18g00054 528 Gene3D MFS general substrate transporter like domains 29 516 IPR036259 -
Accr18g00054 528 PANTHER SUGAR TRANSPORTER 34 509 - -
Accr18g00054 528 FunFam Sucrose transport protein 32 510 - -
Accr18g00054 528 NCBIfam sucrose/proton symporter 34 515 IPR005989 GO:0005886|GO:0008515|GO:0015770
Accr18g00054 528 Pfam MFS/sugar transport protein 44 203 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr18g00054 15 528 Sucrose Transporter Gene Family AT1G71890 64.107 0.0 655
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr18g00054 K15378 - gmx:547679 769.615