Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr18g00039 ATGGAGATGGAATCTTGTGTTCCGCCGGGCTTTAGATTTCGTCCGACAGAGGAAGAACTAGTAGGGTACTACCTCAAGAAGAAGATAAACTCGATGAAAATGGATCGAGATGTGATTGGAGAGATCGATCTGTACAAGATCGAACCGTGGGACATTCAAGATAGATGCAAGATGGGGTACGAGGAAGAGAAGGAGTGGTATTTCTTCAGTCATAAGGACAAGAAGTATCCTACAGGGACGAGGACGAACAGGGCGACGGCGGCAGGGTTCTGGAAAGCAACAGGGAGGGACAAGGCGGTGATAACGAAGAAGAACAGAATCATAGGAATGAGGAAGACGCTCGTCTTCTACAAGGGACGTGCCCCTTATGGCTCCAAGACCGATTGGATTATGCATGAATATCGCCTCCAAACCTCCCAACACGCCCCTCCTCAGGAAGAAGGATGGGTAGTGTGCCGAGCATTCAAGAAACCTAGTCCTACGACTCAGAATAGACAAAGTTTCGAATGTTGGAGCAGCCAAGCACTCTTTTTCAGGGACCAAATAAGCAACCCTACGAGACCTCAATCTCTATCATTTCCCAACGAAACCCTGAATCAGATGCTTTATCCAACAAATGAAGGACCAAGTTTCAGCCATCCCTTCACTTCCAATCAACGCCACCAACAGTTTTTGTCATTGGAGGACAATAACAACAGCCAGCTTGTTGAGCTCATTCCACAGCTACATAGCCCCACAACAGCTAGAGCAGTGAAACAACATGGCTTCACAAATGAAGACTGTTACAGTAACAGTCAGGAAGGGACTACGACGACCAATAATAATAACGTTAACGATGGTCAAGGCATTGATTGGAAGAGCTTGGACAACTTGTTCACTTCCCAGTTCGCGGATGATGATACTGCCTCTGCTGCTGCTGCTTATTTTTCTCATCCAAACATGCCCTTGATGCAGCATAATAGTAGTCGTCATGACCTACAAGTATCTCAAAATCATCAAGCTAGCCATGTCCTGGGATGCTTTCCTCATTCATAA 1035 0.4628 MEMESCVPPGFRFRPTEEELVGYYLKKKINSMKMDRDVIGEIDLYKIEPWDIQDRCKMGYEEEKEWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKAVITKKNRIIGMRKTLVFYKGRAPYGSKTDWIMHEYRLQTSQHAPPQEEGWVVCRAFKKPSPTTQNRQSFECWSSQALFFRDQISNPTRPQSLSFPNETLNQMLYPTNEGPSFSHPFTSNQRHQQFLSLEDNNNSQLVELIPQLHSPTTARAVKQHGFTNEDCYSNSQEGTTTTNNNNVNDGQGIDWKSLDNLFTSQFADDDTASAAAAYFSHPNMPLMQHNSSRHDLQVSQNHQASHVLGCFPHS 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr18g00039 344 Pfam No apical meristem (NAM) protein 8 136 IPR003441 GO:0003677|GO:0006355
Accr18g00039 344 Gene3D NAC domain 16 160 IPR036093 GO:0003677|GO:0006355
Accr18g00039 344 FunFam Nac domain-containing protein 86 16 160 - -
Accr18g00039 344 ProSiteProfiles NAC domain profile. 7 157 IPR003441 GO:0003677|GO:0006355
Accr18g00039 344 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 4 259 - -
Accr18g00039 344 SUPERFAMILY NAC domain 5 157 IPR036093 GO:0003677|GO:0006355
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr18g00039 3 344 NAC Transcription Factor Family AT1G71930 48.305 1.08e-101 301
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Accr18g00039 NAM 1.3e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr18g00039 - - gmx:100811057 402.905