Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr18g00038 ATGACAGCAACCCAGTATTCTGAGAAATCAAGTATGGAGATGGAATCTTGTGTTCCGCCGGGCTTTAGATTTCGTCCGACAGAGGAAGAACTAGTAGGGTACTACCTCAAGAAGAAGATAAACTCGATGAAAATGGATCGAGATGTGATTGGAGAGATCGATCTGTACAAGATCGAACCGTGGGACATTCAAGATAGATGCAAGATGGGGTACGAGGAAGAGAAGGAGTGGTATTTCTTCAGTCATAAGGACAAGAAGTATCCTACAGGGACGAGGACGAACAGGGCGACGGCGGCAGGGTTCTGGAAAGCAACAGGGAGGGACAAGGCGGTGATAACGAAGAAGAACAGAATCATAGGAATGAGGAAGACGCTCGTCTTCTACAAGGGACGTGCCCCTTATGGCTCCAAGACCGATTGGATTATGCATGAATATCGCCTCCAAACCTCCCAACACGCCCCTCCTCAGGAAGAAGGATGGGTAGTGTGCCGAGCATTCAAGAAACCTAGTCCTACGACTCAGAATAGACAAAGTTTCGAATGTTGGAGCAGCCAAGCACTCTTTTTCAGGGACCAAATAAGCAACCCTACGAGACCTCAATCTCTATCATTTCCCAACGAAACCCTGAATCAGATGCTTTATCCAACAAATGAAGGACCAAGTTTCAGCCATCCCTTCACTTCCAATCAACGCCACCAACAGTTTTTGTCATTGGAGGACAATAACAACAGCCAGCTTGTTGAGCTCATTCCACAGCTACATAGCCCCACAACAGCTAGAGCAGTGAAACAACATGGCTTCACAAATGAAGACTGTTACAGTAACAGTCAGGAAGGGACTACGACGACCAATAATAATAACGTTAACGATGGTCAAGGCATTGATTGGAAGAGCTTGGACAACTTGTTCACTTCCCAGTTCGCGGATGATGATACTGCCTCTGCTGCTGCTGCTTATTTTTCTCATCCAAACATGCCCTTGATGCAGCATAATAGTAGTCGTCATGACCTACAAGTATCTCAAAATCATCAAGCTAGCCATGTCCTGGGATGCTTTCCTCATTCATAA 1068 0.4607 MTATQYSEKSSMEMESCVPPGFRFRPTEEELVGYYLKKKINSMKMDRDVIGEIDLYKIEPWDIQDRCKMGYEEEKEWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKAVITKKNRIIGMRKTLVFYKGRAPYGSKTDWIMHEYRLQTSQHAPPQEEGWVVCRAFKKPSPTTQNRQSFECWSSQALFFRDQISNPTRPQSLSFPNETLNQMLYPTNEGPSFSHPFTSNQRHQQFLSLEDNNNSQLVELIPQLHSPTTARAVKQHGFTNEDCYSNSQEGTTTTNNNNVNDGQGIDWKSLDNLFTSQFADDDTASAAAAYFSHPNMPLMQHNSSRHDLQVSQNHQASHVLGCFPHS 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr18g00038 355 Pfam No apical meristem (NAM) protein 19 147 IPR003441 GO:0003677|GO:0006355
Accr18g00038 355 Gene3D NAC domain 27 171 IPR036093 GO:0003677|GO:0006355
Accr18g00038 355 FunFam Nac domain-containing protein 86 27 171 - -
Accr18g00038 355 SUPERFAMILY NAC domain 12 168 IPR036093 GO:0003677|GO:0006355
Accr18g00038 355 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 15 270 - -
Accr18g00038 355 ProSiteProfiles NAC domain profile. 18 168 IPR003441 GO:0003677|GO:0006355
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr18g00038 14 355 NAC Transcription Factor Family AT1G71930 48.305 1.07e-101 301
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Accr18g00038 NAM 1.4e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr18g00038 - - gmx:100811057 409.068