Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr18g00036 ATGGAGAAGAAACCTTCTTCAGCAAAAACCATGTCGGTCTTGCCTTACGAAACCCAGAAGCTCAGAGACCATTACCTTGTGGGGAAGAAGCTAGGGAAAGGCTACAGTGCGACCACCTACCTCTGTACGCACAAGGTATCAGGTGAACAATTCGCTTGCAAATCGATTCCCAAGCGGAAACTCTTGTCCAAGGTCGATTACGATGATGTGTGGAGAGAGATTCAGATCATGCATCATCTGTCGGAGCACCCCCTTGTGGTTCGGATACAAGGGACGTACGAGGACGCTGTGTTTGTGCACCTGGTTATGGAGCTGTGTCGTGGGGGTGAGCTGTTTGATAGGATTATTCAGAAGGGGCATTACAGTGAGAAAGAGGCGGTCAAGTTGATGAAGACCATAGTTGGTGTGGTCGAAGCTTGTCACTCTTTTGGGGTAATGCATAGGGATCTCAAGCCTGAGAATTTCTTGTTTGATAGTCCTAGTGACGACGCTCAGATGAAGGCCACGGATTTTGGCCTCTCTGCCTTTTACATGCCAGGACAAACCTTTTCCGAGATACTTGGAAGCGCCTACTATATCGCCCCTGAGGTTTTGCGCAGGAGTTATGGACCAGAAGCAGATGTATGGAGTGCTGGAGTTATCCTTTACATCTTGCTGAGTGGGGTCCCACCTTTTTGGGCCGAAAATGAAACTGGCATTTTCAATCACATTATAGATGGAAAGCCAGATTATGAATCTGACCCATGGCCGAGCATATCAGAAAGTGCAAAAGATTTGGTGATCAAAATGCTAGAGAAGGACCCGAAGAAAAGAATTTCTGCCCATGAAGTCTTGTGTCACCCTTGGATAAATGATGATAATGTTGCCCCTGACAGACCGCTGGATTCCGCAGTTTTGTCCCGTCTGAAACAGTTCTCAGAAATGAATAAATTGAAGAAGATGGCTTTACGGGTGATAGCAGAAAGACTTTCAGAAGAAGAAATCGGTGGCTTAAAAGAGTTGTTCAAGATGATTGACACAGACAGCAGTGGGACTATAACATTTGAGGAACTCAAAGAAGGTCTAAAAAAAGTTGGTTCTGATCTAATGGAATCCGAAATCAAATCCCTAATGGATGCGGCCGACATAGACCAAAGTGGATCAATTGACTATGGTGAATTTCTTGCTGCCACACTACACATGAATAAGATGGAAAGAGAGGAAAATTTAGTCACAGCATTTTCCTATTTTGACAAAGATGGTAGTGGATACATCACCATTGATGAGCTTGAACAAGCTTGTAAAGAGTTTGGCTTAGGTGACGTAAATCCAGATGTTATGTCAGAAATTGATCTAGACAATGATGGGAGAATTGATTATGGGGAGTTTGTAGCAATGATGAAGCAGGGGGAAGGAGGGGCTGGCCGCAGCAGAGCCACAAGAGGCAATTTGAACTTCAATATAGCAGATGCCTTCCAACAAGCAAATGACTCATCCTGA 1479 0.4476 MEKKPSSAKTMSVLPYETQKLRDHYLVGKKLGKGYSATTYLCTHKVSGEQFACKSIPKRKLLSKVDYDDVWREIQIMHHLSEHPLVVRIQGTYEDAVFVHLVMELCRGGELFDRIIQKGHYSEKEAVKLMKTIVGVVEACHSFGVMHRDLKPENFLFDSPSDDAQMKATDFGLSAFYMPGQTFSEILGSAYYIAPEVLRRSYGPEADVWSAGVILYILLSGVPPFWAENETGIFNHIIDGKPDYESDPWPSISESAKDLVIKMLEKDPKKRISAHEVLCHPWINDDNVAPDRPLDSAVLSRLKQFSEMNKLKKMALRVIAERLSEEEIGGLKELFKMIDTDSSGTITFEELKEGLKKVGSDLMESEIKSLMDAADIDQSGSIDYGEFLAATLHMNKMEREENLVTAFSYFDKDGSGYITIDELEQACKEFGLGDVNPDVMSEIDLDNDGRIDYGEFVAMMKQGEGGAGRSRATRGNLNFNIADAFQQANDSS 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr18g00036 492 ProSiteProfiles Protein kinase domain profile. 25 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr18g00036 492 FunFam Calcium-dependent protein kinase 1 27 110 - -
Accr18g00036 492 ProSitePatterns EF-hand calcium-binding domain. 339 351 IPR018247 -
Accr18g00036 492 CDD EFh 406 461 IPR002048 GO:0005509
Accr18g00036 492 FunFam Calcium-dependent protein kinase 1 291 464 - -
Accr18g00036 492 ProSiteProfiles EF-hand calcium-binding domain profile. 326 361 IPR002048 GO:0005509
Accr18g00036 492 PANTHER SERINE/THREONINE-PROTEIN KINASE 19 456 - -
Accr18g00036 492 ProSitePatterns EF-hand calcium-binding domain. 444 456 IPR018247 -
Accr18g00036 492 ProSiteProfiles EF-hand calcium-binding domain profile. 438 466 IPR002048 GO:0005509
Accr18g00036 492 SMART efh_1 366 394 IPR002048 GO:0005509
Accr18g00036 492 SMART efh_1 330 358 IPR002048 GO:0005509
Accr18g00036 492 SMART efh_1 434 463 IPR002048 GO:0005509
Accr18g00036 492 SMART efh_1 402 430 IPR002048 GO:0005509
Accr18g00036 492 ProSitePatterns EF-hand calcium-binding domain. 375 387 IPR018247 -
Accr18g00036 492 FunFam Calcium-dependent protein kinase SK5 111 295 - -
Accr18g00036 492 CDD STKc_CAMK 24 282 - -
Accr18g00036 492 Pfam Protein kinase domain 27 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr18g00036 492 ProSitePatterns Protein kinases ATP-binding region signature. 31 54 IPR017441 GO:0005524
Accr18g00036 492 SUPERFAMILY Protein kinase-like (PK-like) 14 303 IPR011009 -
Accr18g00036 492 ProSitePatterns Serine/Threonine protein kinases active-site signature. 145 157 IPR008271 GO:0004672|GO:0006468
Accr18g00036 492 Pfam EF-hand domain pair 331 391 IPR002048 GO:0005509
Accr18g00036 492 Pfam EF-hand domain pair 401 461 IPR002048 GO:0005509
Accr18g00036 492 Gene3D Transferase(Phosphotransferase) domain 1 111 290 - -
Accr18g00036 492 SMART serkin_6 25 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr18g00036 492 ProSitePatterns EF-hand calcium-binding domain. 411 423 IPR018247 -
Accr18g00036 492 ProSiteProfiles EF-hand calcium-binding domain profile. 362 397 IPR002048 GO:0005509
Accr18g00036 492 Gene3D - 291 463 - -
Accr18g00036 492 CDD EFh 331 390 IPR002048 GO:0005509
Accr18g00036 492 ProSiteProfiles EF-hand calcium-binding domain profile. 398 433 IPR002048 GO:0005509
Accr18g00036 492 Gene3D Phosphorylase Kinase; domain 1 26 110 - -
Accr18g00036 492 SUPERFAMILY EF-hand 308 462 IPR011992 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr18g00036 1 492 EF-hand Containing Proteins AT4G09570 76.268 0.0 790
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Accr18g00036 Pkinase 5.2e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr18g00036 K13412 - cave:132189650 808.135