Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr18g00025 ATGTCTAGAAAATGGGGTTGGTTTTCTGCAGTCAAGAAAGCTATCGTTGTTTTTGCTGATCACAAGAAAGATCAGAAAAACAATAAGTTGAAGACAACATGGCCTGCCGAACCCGCAGATTTGGAACCAGCTCGGTCATCCGAAGAAAAACCAACATTTGATGTTGCTCCTCCTTCTCCTCCTCCCTACATTGGCACTGATCAGGAAGAGATCAATGAACAGATCATCAAGCAAGCAGCTTATTCGACGGATGATGATGATGATGCCACTAGTGCTGTTGCAGCAGCAGATGCTGTAACTGCTGATGATGCACAGGCCCCTGAAGAGGTTGTTCAACCAGCAAGTCCGCCTCATTACTTGGAGAAGACATGGGAAGAAATAGCTGCCATCAAAATTCAGACAGCATTTCGAGGGTTTTTGGCAAGAAGAGCATTGCATTCATTGAGAAGGTTGATGAGGTTGAAAACATCGATACAAGGGCACTGTGTGAAACAGCAAGCAGCAGAGTCCTTACGATGCATGAGGACTATTGCTAAGGTGCAGTCTCAGATTCGTGAGAGGAGAATTAGAATGTCTGAGGAGAACCAGTCGCTTCAGCGCCAACTGCAGGGCAAACATGAAAAGGAACTCAATAAGCCCCAAACCACTGGAGGAGAAGATTGGGATCATAGCACGAAATCTAAGAAAGAAATTGAAGCAAGGGTGTTGGACAGAAAAGAAGCAGCAATGAGAAGAGAGAAAGCTCGAACGTATTCATCCATACATCAGCAAACATGGAGGAAGCAGCAGGCTTCAAAGAGTGGAAATAGGAGGACGATGAATCCAGATTGGAGTTGGAGATGGGGAGAGCGATGGATGGGGTCACGGCCATGGGATGAGAGGAGTGGCGGTTCAGAGGGTGATGGCTGCCGTGCCCAAAAGCCAAGCCGCCCTCCCACTCCCACCCAGCAGCAGCGGAGGCATAGCATTTCAGGACTGTCTGTAAGAGACGATGAGGACAGCAGCGGTTCATCAGGGAAGGCCAAATATTCTGTTGCAGCTCCCAAATTATCAGCTCTCTCCACAGACACCAACACTTGTCCCTCTGCTTCAGCTTCAAAGAGGCATTCTTGTCCCCCTCACATCCTCGCTTTCTTCCAACCACCCCTCCCCTCTCACTCATAA 1164 0.4828 MSRKWGWFSAVKKAIVVFADHKKDQKNNKLKTTWPAEPADLEPARSSEEKPTFDVAPPSPPPYIGTDQEEINEQIIKQAAYSTDDDDDATSAVAAADAVTADDAQAPEEVVQPASPPHYLEKTWEEIAAIKIQTAFRGFLARRALHSLRRLMRLKTSIQGHCVKQQAAESLRCMRTIAKVQSQIRERRIRMSEENQSLQRQLQGKHEKELNKPQTTGGEDWDHSTKSKKEIEARVLDRKEAAMRREKARTYSSIHQQTWRKQQASKSGNRRTMNPDWSWRWGERWMGSRPWDERSGGSEGDGCRAQKPSRPPTPTQQQRRHSISGLSVRDDEDSSGSSGKAKYSVAAPKLSALSTDTNTCPSASASKRHSCPPHILAFFQPPLPSHS 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr18g00025 387 MobiDBLite consensus disorder prediction 309 323 - -
Accr18g00025 387 SMART iq_5 124 146 IPR000048 GO:0005515
Accr18g00025 387 Pfam IQ calmodulin-binding motif 128 145 IPR000048 GO:0005515
Accr18g00025 387 ProSiteProfiles IQ motif profile. 125 153 IPR000048 GO:0005515
Accr18g00025 387 MobiDBLite consensus disorder prediction 25 66 - -
Accr18g00025 387 PANTHER IQ-DOMAIN 5-RELATED 1 372 - -
Accr18g00025 387 MobiDBLite consensus disorder prediction 193 276 - -
Accr18g00025 387 Coils Coil 181 201 - -
Accr18g00025 387 MobiDBLite consensus disorder prediction 350 366 - -
Accr18g00025 387 MobiDBLite consensus disorder prediction 193 251 - -
Accr18g00025 387 MobiDBLite consensus disorder prediction 288 374 - -
Accr18g00025 387 MobiDBLite consensus disorder prediction 252 274 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr18g00025 1 345 IQD Protein Family AT5G03040 37.561 5.99e-67 217
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr18g00025 - - pcin:129292262 378.252