Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr18g00022 ATGGGCTTTCCTTCTTGGCTCTGCTTATGTTTGCATTTATTCATTATTTTGGGAATCTGTGTGGCTTCTCCTCTTGGAGATCAAAAGAGAGATAGGATCACTGAGTTGCCAGGACAACCAAAGAATGTGGGTTTTGCTCAGTACTCTGGCTATGTGACAGTGAATAAGGAGTCAGGGAGGGCATTGTTTTATTGGTTGACTGAAGCATCAACGAATCGTGGACCCAAGTCAAGGCCATTACTGTTATGGCTTAATGGCGGTCCTGGATGCTCCTCTATTGCTTATGGGGCTTCTGAAGAGATAGGACCTTTTCGCATTAGGCCTGATGGGACTTCACTTTACTCAAATCCTTACGCTTGGAACAAATTGGCAAATATACTGTTCCTAGATTCCCCTGCTGGTGTTGGCTTTTCATATACGAACAAAACGTCAGATCTGTTTACAATGGGAGATCGGAGAACAGCTGAAGATGCATATGCATTTCTTGTTAATTGGTTTGAAAGATTTCCTCAGTATAGGCATAGAGAATTCTACATTGCTGGAGAAAGTTATGCTGGCCATTTTGTTCCTCAGTTGGCTCAGATTATTTACCAGAAAAGCAAGGGTATCAAGAATCCGGTTATTAATTTTAAGGGATTTATGGTTGGAAATGCTGTCACTGATGATTACCATGATTACATTGGCACCTTTGAGTACTGGTGGACTCATGGCCTCATTTCAGATTCCACATATAGGATGCTGCGAAAGGCCTGTACTTCTGGGTCCTCCCTGCATCCAACAGTGCAATGCATGGAGGCCCTCAGAGTGGCAGTTTTGGAACAGGGCAACATTGATCCATATAGCATTTACACACGACCATGCAATAACACAGCACCACTTAGACATGGCTTGAGGGGTCGCTACCCATGGATGTCTCGAGCATATGATCCCTGCACAGAAAGGTTTGCAGACTTATACTTCAATCGTCCAGAAGTTCAGAAAGCACTGCATGCCAATACAACTGGGATGAATTATTCATGGAAGTCTTGCAGTGACATTGTTGGGAATTATTGGGCGGATTCTCCACTATCTATGCTCCCTATATACCGTGAACTCATTCAAGCTGGTCTCAGGATATGGGTATTCAGTGGAGATACGGATGCCGTGGTCCCAGTAACTGCAACTCGATATTCTATTGATGCCTTGACGCTGCCTACCATCGTCAACTGGTATCCTTGGAATGATAATGGCAAGGTTGGAGGTTGGAGCCAAGTTTATAAAGGGCTGACGTTGGTGACGGTGACAGGAGCAGGGCATGAGGTTCCACTTCACAAGCCTCGCCAAGCATTTATTCTGTTAAGGTCTTTCTTGGAAAACAAGTCCATGCCCAGCTGA 1374 0.4461 MGFPSWLCLCLHLFIILGICVASPLGDQKRDRITELPGQPKNVGFAQYSGYVTVNKESGRALFYWLTEASTNRGPKSRPLLLWLNGGPGCSSIAYGASEEIGPFRIRPDGTSLYSNPYAWNKLANILFLDSPAGVGFSYTNKTSDLFTMGDRRTAEDAYAFLVNWFERFPQYRHREFYIAGESYAGHFVPQLAQIIYQKSKGIKNPVINFKGFMVGNAVTDDYHDYIGTFEYWWTHGLISDSTYRMLRKACTSGSSLHPTVQCMEALRVAVLEQGNIDPYSIYTRPCNNTAPLRHGLRGRYPWMSRAYDPCTERFADLYFNRPEVQKALHANTTGMNYSWKSCSDIVGNYWADSPLSMLPIYRELIQAGLRIWVFSGDTDAVVPVTATRYSIDALTLPTIVNWYPWNDNGKVGGWSQVYKGLTLVTVTGAGHEVPLHKPRQAFILLRSFLENKSMPS 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr18g00022 457 Gene3D alpha/beta hydrolase 27 289 IPR029058 -
Accr18g00022 457 ProSitePatterns Serine carboxypeptidases, serine active site. 179 186 IPR018202 GO:0004185
Accr18g00022 457 FunFam Carboxypeptidase 27 289 - -
Accr18g00022 457 ProSitePatterns Serine carboxypeptidases, histidine active site. 422 439 IPR033124 GO:0004185
Accr18g00022 457 FunFam Carboxypeptidase 308 455 - -
Accr18g00022 457 Gene3D - 358 451 - -
Accr18g00022 457 PRINTS Carboxypeptidase C serine protease (S10) family signature 422 435 IPR001563 GO:0004185|GO:0006508
Accr18g00022 457 PRINTS Carboxypeptidase C serine protease (S10) family signature 116 128 IPR001563 GO:0004185|GO:0006508
Accr18g00022 457 PRINTS Carboxypeptidase C serine protease (S10) family signature 165 190 IPR001563 GO:0004185|GO:0006508
Accr18g00022 457 PRINTS Carboxypeptidase C serine protease (S10) family signature 129 139 IPR001563 GO:0004185|GO:0006508
Accr18g00022 457 Gene3D - 311 347 - -
Accr18g00022 457 FunFam Carboxypeptidase 358 452 - -
Accr18g00022 457 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 33 439 IPR001563 GO:0004185|GO:0006508
Accr18g00022 457 Pfam Serine carboxypeptidase 37 452 IPR001563 GO:0004185|GO:0006508
Accr18g00022 457 SUPERFAMILY alpha/beta-Hydrolases 28 455 IPR029058 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr18g00022 315 455 Calmodulin-binding Proteins AT2G22960 27.465 1.18e-12 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr18g00022 K16297 - gmx:100805722 832.017