Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr18g00009 ATGTTTTCAAGACTAATACATCCTCACGAAGGGATATTTGGTCAAGAAAATATGCAGGGTGGATTGAATCAGAGTCACCTTGGAGACCCATGTCTTGTCCTGACTGCTGATCCCAAACCTCGTCTTCGTTGGACTGCTGACCTTCACGAGCGATTTGTTGATGCTGTCACTCAGCTTGGAGGTGCCAGTAAAGCTACACCAAAAGCAATCATGCGGACCATGAATGTCAAAGGTTTGACTCTTTATCATTTAAAGAGTCATCTTCAGAAATACAGACTTGGCAAGCAATCAGGAAAAGATACTGGAGAGGTATGCAAAGATGAAAGCCCTGGCGACTCTGCTCCAAAGTTGCCGGCTTCTGATGCAAATGAAGGTCACGAAGTCAAGGAAGCACTAAGAGCACAAATGGAAGTGCAAAGTAAACTACACTTGCTAGTGGAGGCTGAGAAGCACTTGCAGATACGCCAGGATGCAGAGAGGAAATATATGGTCATGCTTGAGAGAGCCTGTAAGATGTTAGCTGATCAATTTATTGGTGCTGAAGTGATAGACAAAGACAACCAAAAATTTCAAGGTATGGGAAATAAAACACCGAAATCTTCCATGCCTGATCCCCTCGCCTTTTGCTCCTTACCATCGAATGAGGTAACTGGAGTCCATGTTCTGGAAGCACAGCCTAGTTTCCAGCAGCAGCGGGGTGACTGTTCCACCGAAAGCTGCTTGACATCACTTGAAAGCCTCGGAGGGTTGACTCTGGAAGGATCTCCGGGTGAAGCTAAAAGGAGGATGCTGAGCTTGGACTCAATGGTGGCGCCTCTAATCTGGAGTGAAGCGAATTTGAGAACTCAAGGCATTCATCTTGCCCAAGTTAATCCTCATGTAATAACTAGGTATGGCATGTAG 903 0.4574 MFSRLIHPHEGIFGQENMQGGLNQSHLGDPCLVLTADPKPRLRWTADLHERFVDAVTQLGGASKATPKAIMRTMNVKGLTLYHLKSHLQKYRLGKQSGKDTGEVCKDESPGDSAPKLPASDANEGHEVKEALRAQMEVQSKLHLLVEAEKHLQIRQDAERKYMVMLERACKMLADQFIGAEVIDKDNQKFQGMGNKTPKSSMPDPLAFCSLPSNEVTGVHVLEAQPSFQQQRGDCSTESCLTSLESLGGLTLEGSPGEAKRRMLSLDSMVAPLIWSEANLRTQGIHLAQVNPHVITRYGM 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr18g00009 300 FunFam Myb family transcription factor 38 96 - -
Accr18g00009 300 Pfam Myb-like DNA-binding domain 42 92 IPR001005 -
Accr18g00009 300 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 36 96 IPR017930 -
Accr18g00009 300 Pfam MYB-CC type transfactor, LHEQLE motif 127 172 IPR025756 -
Accr18g00009 300 SUPERFAMILY Homeodomain-like 39 95 IPR009057 -
Accr18g00009 300 MobiDBLite consensus disorder prediction 93 122 - -
Accr18g00009 300 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 15 248 IPR044848 GO:0003700
Accr18g00009 300 MobiDBLite consensus disorder prediction 93 110 - -
Accr18g00009 300 Gene3D - 38 96 - -
Accr18g00009 300 NCBIfam myb-like DNA-binding domain, SHAQKYF class 39 94 IPR006447 GO:0003677
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr18g00009 17 244 G2-like Transcription Factor Family AT3G24120 46.185 6.83e-60 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Accr18g00009 Myb_DNA-binding 1.2e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr18g00009 - - vum:124825518 443.736