Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr18g00008 ATGTTTTCAAGACTAATACATCCTCACGAAGGGATATTTGGTCAAGAAAATATGCAGGGTGGATTGAATCAGAGTCACCTTGGAGACCCATGTCTTGTCCTGACTGCTGATCCCAAACCTCGTCTTCGTTGGACTGCTGACCTTCACGAGCGATTTGTTGATGCTGTCACTCAGCTTGGAGGTGCCAGTAAAGCTACACCAAAAGCAATCATGCGGACCATGAATGTCAAAGGTTTGACTCTTTATCATTTAAAGAGTCATCTTCAGAAATACAGACTTGGCAAGCAATCAGGAAAAGATACTGGAGAGGTATGCAAAGATGGAGTATCTGCTTCATATCTTTTAGAAAGCCCTGGCGACTCTGCTCCAAAGTTGCCGGCTTCTGATGCAAATGAAGGTCACGAAGTCAAGGAAGCACTAAGAGCACAAATGGAAGTGCAAAGTAAACTACACTTGCTAGTGGAGGCTGAGAAGCACTTGCAGATACGCCAGGATGCAGAGAGGAAATATATGGTCATGCTTGAGAGAGCCTGTAAGATGTTAGCTGATCAATTTATTGGTGCTGAAGTGATAGACAAAGACAACCAAAAATTTCAAGGTATGGGAAATAAAACACCGAAATCTTCCATGCCTGATCCCCTCGCCTTTTGCTCCTTACCATCGAATGAGGTAACTGGAGTCCATGTTCTGGAAGCACAGCCTAGTTTCCAGCAGCAGCGGGGTGACTGTTCCACCGAAAGCTGCTTGACATCACTTGAAAGCCTCGGAGGGTTGACTCTGGAAGGATCTCCGGGTGAAGCTAAAAGGAGGATGCTGAGCTTGGACTCAATGGTGGCGCCTCTAATCTGGAGTGAAGCGAATTTGAGAACTCAAGGCATTCATCTTGCCCAAGTTAATCCTCATGTAATAACTAGGTATGGCATGTAG 927 0.4542 MFSRLIHPHEGIFGQENMQGGLNQSHLGDPCLVLTADPKPRLRWTADLHERFVDAVTQLGGASKATPKAIMRTMNVKGLTLYHLKSHLQKYRLGKQSGKDTGEVCKDGVSASYLLESPGDSAPKLPASDANEGHEVKEALRAQMEVQSKLHLLVEAEKHLQIRQDAERKYMVMLERACKMLADQFIGAEVIDKDNQKFQGMGNKTPKSSMPDPLAFCSLPSNEVTGVHVLEAQPSFQQQRGDCSTESCLTSLESLGGLTLEGSPGEAKRRMLSLDSMVAPLIWSEANLRTQGIHLAQVNPHVITRYGM 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr18g00008 308 Gene3D - 38 96 - -
Accr18g00008 308 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 15 256 IPR044848 GO:0003700
Accr18g00008 308 FunFam Myb family transcription factor 38 96 - -
Accr18g00008 308 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 36 96 IPR017930 -
Accr18g00008 308 Pfam Myb-like DNA-binding domain 42 92 IPR001005 -
Accr18g00008 308 SUPERFAMILY Homeodomain-like 39 95 IPR009057 -
Accr18g00008 308 NCBIfam myb-like DNA-binding domain, SHAQKYF class 39 94 IPR006447 GO:0003677
Accr18g00008 308 Pfam MYB-CC type transfactor, LHEQLE motif 135 180 IPR025756 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr18g00008 17 252 G2-like Transcription Factor Family AT3G24120 46.988 7.87e-61 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Accr18g00008 Myb_DNA-binding 1.3e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr18g00008 - - vum:124825518 460.299